Homologs in group_505

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01005 FBDBKF_01005 100.0 Morganella morganii S1 efeB Periplasmic deferrochelatase/peroxidase EfeB
EHELCC_00540 EHELCC_00540 100.0 Morganella morganii S2 efeB Periplasmic deferrochelatase/peroxidase EfeB
NLDBIP_02920 NLDBIP_02920 100.0 Morganella morganii S4 efeB Periplasmic deferrochelatase/peroxidase EfeB
HKOGLL_02610 HKOGLL_02610 100.0 Morganella morganii S5 efeB Periplasmic deferrochelatase/peroxidase EfeB
F4V73_RS07080 F4V73_RS07080 88.3 Morganella psychrotolerans - Dyp-type peroxidase
PMI_RS09060 PMI_RS09060 69.1 Proteus mirabilis HI4320 - Dyp-type peroxidase

Distribution of the homologs in the orthogroup group_505

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_505

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8XBI9 4.24e-131 377 59 1 299 1 yfeX Dye-decolorizing peroxidase YfeX Escherichia coli O157:H7
P76536 8.49e-130 374 59 1 299 1 yfeX Dye-decolorizing peroxidase YfeX Escherichia coli (strain K12)
Q743F4 1.11e-52 179 38 6 257 1 MAP_0631c Dye-decolorizing peroxidase Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10)
I6Y4U9 3.21e-52 177 39 6 252 1 dyp Dye-decolorizing peroxidase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
C0ZVK5 5.98e-50 171 37 6 262 1 RER_59910 Dye-decolorizing peroxidase Rhodococcus erythropolis (strain PR4 / NBRC 100887)
A0A3T0E4B9 7.64e-45 159 37 6 253 1 CXR29_00095 Dye-decolorizing peroxidase Brevibacterium linens
Q0TJ48 0.00063 44 23 12 291 3 efeB Deferrochelatase Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1A9S3 0.000701 44 23 12 293 3 efeB Deferrochelatase Escherichia coli O1:K1 / APEC
P31545 0.00072 44 23 12 291 1 efeB Deferrochelatase Escherichia coli (strain K12)
Q1RDJ8 0.000753 44 23 12 291 3 efeB Deferrochelatase Escherichia coli (strain UTI89 / UPEC)
Q8CW71 0.000753 44 23 12 291 2 efeB Deferrochelatase Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_04435
Feature type CDS
Gene efeB
Product Periplasmic deferrochelatase/peroxidase EfeB
Location 160727 - 161623 (strand: -1)
Length 897 (nucleotides) / 298 (amino acids)

Contig

Accession ZDB_361
Length 286024 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_505
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04261 Dyp-type peroxidase, N-terminal
PF20628 Dyp-type peroxidase, C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2837 Inorganic ion transport and metabolism (P) P Periplasmic deferrochelatase/peroxidase EfeB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07223 porphyrinogen peroxidase [EC:1.11.1.-] - -

Protein Sequence

MSQAQSGILPEHCRFGIFIEANTKGDLPAIRRGCQVFLAALKKLQTQFAADQLSATVAFGHDLWRQLGSQSSAPELKNFRELGRGLAPATQYDLLIHIHSQRHDINFSLAQAAVAAFADAVEIQGETHGFRWTEERDLSGFIDGTENPEGDERPDVALIAEGEDAGGSYILTQRWAHSLNKWTRFSEEQQEKMIGRTKADSTELDENVRNVTSHVSRVVIEEEGEELSILRQSLPYGTASGEHGLFFIAYCGRLHNIEQQLLSMFGETDGKFDDLLRFSKPKTGAYYYAPSLEQLSAL

Flanking regions ( +/- flanking 50bp)

TTTATGATAAGGCCATTTCCTGATCAGACTGACGATGCAAAGGGAGCAATATGTCACAAGCACAAAGCGGTATTCTGCCGGAACACTGCCGTTTCGGTATTTTTATTGAAGCAAACACCAAAGGTGATTTACCGGCGATCCGGCGTGGTTGTCAGGTTTTCCTGGCAGCGCTGAAAAAGTTACAGACACAGTTTGCGGCTGATCAGCTGAGTGCCACGGTGGCATTCGGTCATGACCTGTGGCGTCAGCTGGGCAGTCAGAGCAGTGCACCGGAGCTGAAAAACTTCCGTGAACTGGGGCGCGGCCTGGCGCCGGCCACACAGTATGATTTACTGATCCACATTCATTCTCAGCGTCATGATATCAACTTCTCGCTGGCACAGGCAGCGGTGGCGGCATTTGCGGATGCGGTTGAGATTCAGGGCGAAACCCACGGCTTCCGCTGGACGGAAGAGCGTGACCTGAGCGGTTTTATCGACGGCACCGAAAACCCGGAAGGGGATGAGCGCCCGGACGTGGCACTGATCGCGGAAGGGGAAGATGCGGGCGGCAGTTATATCCTGACTCAGCGCTGGGCACACAGCCTGAATAAATGGACCCGTTTTTCTGAAGAGCAGCAGGAAAAGATGATTGGCCGCACCAAAGCAGACAGCACTGAGCTGGATGAGAATGTGCGCAATGTAACCTCTCATGTTTCCCGCGTGGTGATTGAAGAAGAGGGCGAAGAGCTTTCCATTCTGCGCCAGAGCCTGCCGTACGGCACTGCCAGCGGTGAGCACGGCCTGTTCTTTATCGCGTACTGCGGTCGTCTGCACAATATTGAGCAGCAATTGCTGAGTATGTTCGGTGAAACCGACGGTAAATTTGATGATCTGCTGCGGTTCAGTAAACCGAAAACCGGGGCTTATTATTATGCGCCGTCGCTGGAACAACTGAGTGCGCTGTAAGAGGGTGTCACTTTAAGTCCGGAACCGGCTGATAACGGGCAAAAACGAAA