Homologs in group_505

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_01005 FBDBKF_01005 69.1 Morganella morganii S1 efeB Periplasmic deferrochelatase/peroxidase EfeB
EHELCC_00540 EHELCC_00540 69.1 Morganella morganii S2 efeB Periplasmic deferrochelatase/peroxidase EfeB
NLDBIP_02920 NLDBIP_02920 69.1 Morganella morganii S4 efeB Periplasmic deferrochelatase/peroxidase EfeB
LHKJJB_04435 LHKJJB_04435 69.1 Morganella morganii S3 efeB Periplasmic deferrochelatase/peroxidase EfeB
HKOGLL_02610 HKOGLL_02610 69.1 Morganella morganii S5 efeB Periplasmic deferrochelatase/peroxidase EfeB
F4V73_RS07080 F4V73_RS07080 67.1 Morganella psychrotolerans - Dyp-type peroxidase

Distribution of the homologs in the orthogroup group_505

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_505

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8XBI9 1.5e-133 383 61 1 299 1 yfeX Dye-decolorizing peroxidase YfeX Escherichia coli O157:H7
P76536 2.03e-132 380 61 1 299 1 yfeX Dye-decolorizing peroxidase YfeX Escherichia coli (strain K12)
C0ZVK5 5.18e-54 182 37 7 275 1 RER_59910 Dye-decolorizing peroxidase Rhodococcus erythropolis (strain PR4 / NBRC 100887)
I6Y4U9 9.68e-53 178 38 5 254 1 dyp Dye-decolorizing peroxidase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
Q743F4 5.5e-49 169 35 7 271 1 MAP_0631c Dye-decolorizing peroxidase Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10)
A0A3T0E4B9 1.22e-44 158 35 5 250 1 CXR29_00095 Dye-decolorizing peroxidase Brevibacterium linens

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS09060
Feature type CDS
Gene -
Product Dyp-type peroxidase
Location 1973694 - 1974590 (strand: -1)
Length 897 (nucleotides) / 298 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_505
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04261 Dyp-type peroxidase, N-terminal
PF20628 Dyp-type peroxidase, C-terminal

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2837 Inorganic ion transport and metabolism (P) P Periplasmic deferrochelatase/peroxidase EfeB

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07223 porphyrinogen peroxidase [EC:1.11.1.-] - -

Protein Sequence

MSHAQSGILVAHSKFGLFIEAMVVGEIDQLRQGCQQFMQSLSELQKQYPDASLGAVVAFGSDLWKKLSDNNSAPELKPFRPLGKGLAPATQRDMLIHIQSMRHDVNFSLAQAAIAAFGNVLQIEEEIHGFRWIEERDLSGFIDGSENPVGDERYGVALINEGIDAGGSYVLVQRYEHNLKKWARFSESDQEKMIGRTKKESIELDESERNITSHVSRVAIEENGEELAILRHSLPYGTASGKHGLYFLAYCGRLYNIEQQLLSMFGEVDGKYDDLLRMSKPVTGSYYFAPSYEVLAAL

Flanking regions ( +/- flanking 50bp)

AATAAACCACATTAATTTATATGTTTTTTATTATTTATTAGGGAAGCAATATGTCTCATGCACAAAGCGGTATTTTAGTCGCACATAGTAAATTCGGTCTATTTATTGAAGCAATGGTGGTGGGGGAAATTGATCAACTACGTCAAGGCTGCCAACAATTTATGCAATCCCTTAGTGAATTACAAAAACAGTATCCTGATGCTTCATTAGGTGCCGTGGTAGCTTTTGGTTCAGATCTTTGGAAAAAATTATCAGATAACAATAGTGCGCCAGAGTTAAAGCCATTTCGTCCATTAGGCAAAGGGTTAGCTCCTGCGACTCAGCGCGATATGCTTATCCATATCCAATCCATGCGTCATGATGTGAATTTCTCATTAGCGCAAGCTGCAATAGCTGCTTTTGGTAACGTGCTCCAAATAGAAGAAGAGATCCACGGTTTCCGCTGGATTGAAGAGCGTGATCTTAGTGGTTTTATTGACGGCTCAGAAAATCCAGTTGGTGACGAGCGCTATGGTGTTGCTTTAATTAATGAAGGTATTGATGCTGGTGGTAGCTATGTTTTGGTTCAACGCTATGAGCATAACCTAAAAAAATGGGCGCGTTTTAGTGAATCAGATCAAGAAAAAATGATTGGTCGTACTAAAAAAGAGAGCATTGAGTTGGATGAATCAGAACGCAATATTACCTCTCATGTATCCCGTGTTGCTATTGAAGAAAATGGTGAAGAGTTAGCGATTTTGCGTCATAGCTTACCTTATGGAACTGCTAGTGGTAAACATGGCCTCTATTTCTTAGCCTACTGTGGCCGTTTATATAATATTGAACAGCAATTACTCAGTATGTTTGGTGAAGTTGATGGTAAATACGATGATTTACTGCGTATGAGTAAACCTGTGACAGGTAGCTACTATTTCGCTCCTTCTTATGAAGTATTAGCCGCTCTGTAAGTCTTAGCGTTACACTACTATTTTGCCACGCCAGTATCATTTACTATGCT