Homologs in group_505

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6 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00120 FBDBKF_00120 100.0 Morganella morganii S1 - Terminase small subunit
FBDBKF_12810 FBDBKF_12810 32.5 Morganella morganii S1 - Terminase small subunit
EHELCC_01425 EHELCC_01425 100.0 Morganella morganii S2 - Terminase small subunit
NLDBIP_02035 NLDBIP_02035 100.0 Morganella morganii S4 - Terminase small subunit
HKOGLL_00040 HKOGLL_00040 100.0 Morganella morganii S5 - Terminase small subunit
F4V73_RS06145 F4V73_RS06145 29.7 Morganella psychrotolerans - terminase small subunit

Distribution of the homologs in the orthogroup group_505

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_505

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P68928 1.13e-11 62 33 6 169 1 1 Terminase small subunit Bacillus phage SF6
P68929 1.13e-11 62 33 6 169 3 1 Terminase small subunit Bacillus phage rho15
P54307 1.5e-10 59 41 1 74 1 1 Terminase small subunit Bacillus phage SPP1
P39785 9.15e-07 50 30 0 84 4 xtmA PBSX phage terminase small subunit Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_03550
Feature type CDS
Gene -
Product Terminase small subunit
Location 375 - 902 (strand: -1)
Length 528 (nucleotides) / 175 (amino acids)
In genomic island -

Contig

Accession ZDB_361
Length 286024 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_505
Orthogroup size 7
N. genomes 6

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Genomic region

Domains

PF03592 Terminase small subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3728 Mobilome: prophages, transposons (X) X Phage terminase, small subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07474 phage terminase small subunit - -

Protein Sequence

MALTDKQEMFCREYLVDLNATQAAIRAGYSDKTARSVGNENLTKPDIEKRIQELMSSRSEQLKVDAEYVLKRLVEIDQMDVLDIMTDDMSIRPVSDWPASWRRYLSGFDLADMFEGRGENREMIGILKKIKWPDKVKNLELLGKHISVQAFRDQIKSEHDVVGTLSDLMDELSGK

Flanking regions ( +/- flanking 50bp)

AGCGACATCAGATACATTCCGGTGGTTGAGGAAAAGAGCAAGAAATAATTATGGCACTCACAGATAAACAGGAAATGTTTTGTCGTGAGTACCTCGTAGATTTGAACGCCACACAGGCGGCTATTCGTGCGGGGTACAGTGATAAAACTGCGCGAAGTGTCGGGAATGAAAACCTGACAAAACCTGACATCGAAAAACGGATTCAGGAATTAATGAGCAGCCGCAGTGAGCAACTTAAGGTTGATGCTGAATATGTGCTGAAGCGCCTGGTTGAAATAGACCAGATGGATGTTCTCGACATTATGACCGATGACATGAGCATAAGGCCGGTCTCCGACTGGCCTGCATCATGGCGGCGCTACCTGAGCGGCTTCGACCTTGCTGATATGTTTGAAGGACGTGGTGAAAATCGGGAAATGATCGGCATCCTGAAGAAAATAAAATGGCCTGACAAGGTCAAGAACCTTGAATTGCTCGGTAAGCACATATCTGTCCAGGCATTCCGGGACCAGATTAAAAGCGAGCATGATGTTGTCGGCACTCTCTCTGACCTGATGGACGAACTATCGGGCAAATAATATGAAGCCAGAGCATTTAGCGTTACTGCGTAATAAGCAATGGCGTCTGA