Homologs in group_505

Help

6 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_00120 FBDBKF_00120 29.7 Morganella morganii S1 - Terminase small subunit
FBDBKF_12810 FBDBKF_12810 39.3 Morganella morganii S1 - Terminase small subunit
EHELCC_01425 EHELCC_01425 29.7 Morganella morganii S2 - Terminase small subunit
NLDBIP_02035 NLDBIP_02035 29.7 Morganella morganii S4 - Terminase small subunit
LHKJJB_03550 LHKJJB_03550 29.7 Morganella morganii S3 - Terminase small subunit
HKOGLL_00040 HKOGLL_00040 29.7 Morganella morganii S5 - Terminase small subunit

Distribution of the homologs in the orthogroup group_505

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_505

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P39785 0.000356 43 24 5 159 4 xtmA PBSX phage terminase small subunit Bacillus subtilis (strain 168)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS06145
Feature type CDS
Gene -
Product terminase small subunit
Location 1298083 - 1298715 (strand: -1)
Length 633 (nucleotides) / 210 (amino acids)
In genomic island GI68

Contig

Accession NZ_VXKB01000001
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_505
Orthogroup size 7
N. genomes 6

Actions

Genomic region

Domains

PF03592 Terminase small subunit

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3728 Mobilome: prophages, transposons (X) X Phage terminase, small subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07474 phage terminase small subunit - -

Protein Sequence

MAQKKPTLTDEQRVLFDALTKQQQQFALGILKGLNQTDAYKQAGYKVKTDAAARSQSSRMLTFANVKSFLSAMSTSALSDAVMTRQEALERLSAIGRASVSEMVEFSEHDMGKDDDGNQVIQAVWRFKDSALQNPQALSAISELTAGKDGIKLKLHDPKAAIKQIVDMQGWEAPKKLDHTSTDGTMTPTGIDLSHLSVDQLLQLREKSRK

Flanking regions ( +/- flanking 50bp)

ATCCTAACAGCGGCGGGCACATTCAGGCGTTTACGATTTAAGGAAAAGGTATGGCACAAAAGAAACCAACGCTCACTGATGAGCAAAGAGTTCTTTTTGATGCCCTGACGAAACAGCAACAGCAATTCGCGTTAGGCATCCTGAAAGGGCTGAATCAGACCGATGCCTACAAACAGGCTGGCTACAAAGTGAAAACCGATGCGGCAGCAAGATCGCAATCAAGCCGAATGCTAACATTTGCTAACGTTAAATCGTTTCTCTCCGCAATGAGCACATCCGCTCTCTCGGATGCCGTTATGACCCGTCAGGAAGCCTTGGAGCGACTATCTGCAATCGGACGTGCGTCAGTATCAGAAATGGTTGAGTTCAGTGAGCACGACATGGGGAAGGATGACGACGGCAATCAGGTTATACAAGCCGTCTGGCGATTCAAAGACTCGGCATTGCAAAACCCACAAGCGCTGTCCGCGATATCTGAACTGACCGCTGGTAAAGACGGCATCAAGTTAAAACTGCACGACCCGAAAGCCGCGATAAAACAAATCGTGGATATGCAAGGGTGGGAAGCGCCGAAGAAACTGGATCACACGTCAACAGATGGCACGATGACCCCGACCGGAATTGACCTTAGCCACCTGAGTGTTGATCAGCTTTTGCAACTGAGAGAAAAATCCAGAAAATAGCCTCTCTTTAACATAATGACCGTTACCCGAATAAGCGAAATCAGGTTCAT