Homologs in group_664

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02365 FBDBKF_02365 100.0 Morganella morganii S1 hrpA ATP-dependent RNA helicase HrpA
EHELCC_02835 EHELCC_02835 100.0 Morganella morganii S2 hrpA ATP-dependent RNA helicase HrpA
NLDBIP_00625 NLDBIP_00625 100.0 Morganella morganii S4 hrpA ATP-dependent RNA helicase HrpA
HKOGLL_01450 HKOGLL_01450 100.0 Morganella morganii S5 hrpA ATP-dependent RNA helicase HrpA
F4V73_RS04745 F4V73_RS04745 92.4 Morganella psychrotolerans hrpA ATP-dependent RNA helicase HrpA
PMI_RS05750 PMI_RS05750 76.5 Proteus mirabilis HI4320 hrpA ATP-dependent RNA helicase HrpA

Distribution of the homologs in the orthogroup group_664

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_664

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43329 0.0 2016 75 1 1290 1 hrpA ATP-dependent RNA helicase HrpA Escherichia coli (strain K12)
P45018 0.0 1773 66 6 1305 3 hrpA ATP-dependent RNA helicase HrpA homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q54F05 2.51e-127 426 37 9 638 3 dhx8 ATP-dependent RNA helicase dhx8 Dictyostelium discoideum
O42945 4.15e-127 413 35 12 671 3 prp43 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase prp43 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P53131 6.55e-126 411 35 11 648 1 PRP43 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O35286 2.64e-125 410 35 10 646 1 Dhx15 ATP-dependent RNA helicase DHX15 Mus musculus
O43143 3.08e-125 410 35 10 646 1 DHX15 ATP-dependent RNA helicase DHX15 Homo sapiens
Q5RAZ4 3.99e-125 410 35 10 646 2 DHX15 ATP-dependent RNA helicase DHX15 Pongo abelii
Q03319 5.18e-125 407 36 10 637 3 prh1 Probable ATP-dependent RNA helicase prh1 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q14562 1.09e-124 420 35 14 722 1 DHX8 ATP-dependent RNA helicase DHX8 Homo sapiens
A2A4P0 1.24e-124 420 35 14 722 2 Dhx8 ATP-dependent RNA helicase DHX8 Mus musculus
O22899 6.1e-124 404 35 12 652 2 At2g47250 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH3 Arabidopsis thaliana
Q7K3M5 6.9e-124 404 34 11 646 2 Dhx15 ATP-dependent RNA helicase DHX15 homolog Drosophila melanogaster
Q8VY00 8.46e-124 413 37 11 637 1 ESP3 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH1 Arabidopsis thaliana
F4IJV4 7.85e-123 410 37 10 635 2 MEE29 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH6 Arabidopsis thaliana
O51767 2.48e-122 403 35 11 627 1 hrpA ATP-dependent RNA helicase HrpA Borreliella burgdorferi (strain ATCC 35210 / DSM 4680 / CIP 102532 / B31)
Q9LZQ9 2.81e-122 400 35 11 651 2 At3g62310 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH2 Arabidopsis thaliana
Q54MH3 6.99e-122 409 36 8 637 3 dhx16 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 Dictyostelium discoideum
A1Z9L3 1.21e-121 412 34 15 731 1 pea ATP-dependent RNA helicase DHX8 Drosophila melanogaster
P24384 2.93e-121 409 36 10 648 1 PRP22 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q5RBD4 3.04e-121 397 36 14 651 2 DHX35 Probable ATP-dependent RNA helicase DHX35 Pongo abelii
Q54NJ4 7.46e-121 396 35 10 636 3 dhx15 Putative ATP-dependent RNA helicase DHX15 Dictyostelium discoideum
Q09530 2.16e-120 407 36 9 641 1 mog-5 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-5 Caenorhabditis elegans
Q9H5Z1 2.23e-120 394 35 13 651 1 DHX35 Probable ATP-dependent RNA helicase DHX35 Homo sapiens
F4JMJ3 2.47e-120 399 36 13 640 2 At4g16680 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH8 Arabidopsis thaliana
Q38953 4.81e-120 405 35 9 637 1 At3g26560 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH5 Arabidopsis thaliana
P34498 3.2e-119 402 38 13 636 1 mog-1 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-1 Caenorhabditis elegans
Q20875 8.94e-119 390 34 12 656 3 ddx-15 Pre-mRNA-splicing factor ATP-dependent RNA helicase ddx-15 Caenorhabditis elegans
F4JRJ6 1.7e-116 383 36 17 659 3 At4g18465 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH9 Arabidopsis thaliana
O60231 4.76e-116 392 35 12 650 1 DHX16 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 Homo sapiens
Q7YR39 5.43e-116 392 35 12 651 3 DHX16 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 Pan troglodytes
Q767K6 7.26e-116 391 35 12 651 3 DHX16 Pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 Sus scrofa
O42643 9.68e-116 394 36 11 644 1 prp22 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q92620 5.61e-115 393 36 12 637 1 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 Homo sapiens
Q17R09 5.26e-114 390 36 12 637 2 DHX38 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 Bos taurus
Q80VY9 9.16e-113 373 33 9 639 1 Dhx33 ATP-dependent RNA helicase DHX33 Mus musculus
Q9BKQ8 3.06e-112 373 36 14 651 3 ddx-35 Probable ATP-dependent RNA helicase DHX35 homolog Caenorhabditis elegans
Q9H6R0 1.26e-111 370 33 9 639 1 DHX33 ATP-dependent RNA helicase DHX33 Homo sapiens
Q9P774 3.79e-111 381 36 15 635 3 prp16 Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q10752 8.66e-111 377 34 14 644 3 cdc28 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein cdc28 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O45244 9.92e-111 376 35 12 640 1 mog-4 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase mog-4 Caenorhabditis elegans
Q8IX18 1.59e-109 367 32 18 709 1 DHX40 Probable ATP-dependent RNA helicase DHX40 Homo sapiens
F4K2E9 1.54e-108 375 34 11 639 1 CUV Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH7 Arabidopsis thaliana
Q5R864 2.33e-108 363 33 15 661 2 DHX40 Probable ATP-dependent RNA helicase DHX40 Pongo abelii
Q5XI69 3.62e-108 363 33 19 710 2 Dhx40 Probable ATP-dependent RNA helicase DHX40 Rattus norvegicus
P15938 7.31e-108 370 38 19 650 1 PRP16 Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q6PE54 2.01e-107 361 33 18 681 1 Dhx40 Probable ATP-dependent RNA helicase DHX40 Mus musculus
Q9VL25 2.09e-107 358 34 15 643 1 ath ATP-dependent RNA helicase DHX33 Drosophila melanogaster
F4IE66 6.21e-103 347 32 14 685 1 RID1 Pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH10 Arabidopsis thaliana
P20095 6.03e-102 348 34 20 667 1 PRP2 Pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q14147 1.72e-99 347 35 9 554 1 DHX34 Probable ATP-dependent RNA helicase DHX34 Homo sapiens
Q9DBV3 2.17e-97 342 36 9 546 1 Dhx34 Probable ATP-dependent RNA helicase DHX34 Mus musculus
Q93Y16 1.06e-96 329 33 15 659 1 At1g27900 Probable pre-mRNA-splicing factor ATP-dependent RNA helicase DEAH4 Arabidopsis thaliana
Q9HE06 6.11e-94 320 31 17 657 3 SPAC20H4.09 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase C20H4.09 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P36009 2.35e-93 320 32 16 656 1 DHR2 Probable ATP-dependent RNA helicase DHR2 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
O17438 6.72e-86 291 34 8 473 2 PRP1 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 (Fragment) Strongylocentrotus purpuratus
F4KGU4 1.39e-82 302 33 12 646 3 At5g10370 ATP-dependent RNA helicase DEAH12, chloroplastic Arabidopsis thaliana
Q9HDY4 6.87e-81 294 30 23 772 3 SPAPB1A10.06c Putative ATP-dependent RNA helicase PB1A10.06c Schizosaccharomyces pombe (strain 972 / ATCC 24843)
P0CE10 2.77e-77 286 32 10 623 3 At4g01020 ATP-dependent RNA helicase DEAH11, chloroplastic Arabidopsis thaliana
Q7L2E3 3.23e-71 265 35 13 517 1 DHX30 ATP-dependent RNA helicase DHX30 Homo sapiens
Q2NKY8 1.24e-70 263 35 13 517 2 DHX30 ATP-dependent RNA helicase DHX30 Bos taurus
Q99PU8 2.72e-70 262 35 12 517 1 Dhx30 ATP-dependent RNA helicase DHX30 Mus musculus
Q5BJS0 3.1e-70 261 35 12 517 1 Dhx30 ATP-dependent RNA helicase DHX30 Rattus norvegicus
Q05B79 4.64e-70 259 31 12 565 1 DHX36 ATP-dependent DNA/RNA helicase DHX36 Bos taurus
Q5R607 6.47e-70 260 35 13 517 2 DHX30 ATP-dependent RNA helicase DHX30 Pongo abelii
O94536 1.31e-69 260 29 17 684 3 ucp12 Putative ATP-dependent RNA helicase ucp12 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q5ZI74 2.48e-69 259 34 13 516 2 DHX30 ATP-dependent RNA helicase DHX30 Gallus gallus
B8A4F4 2.58e-69 259 32 14 603 2 tdrd9 ATP-dependent RNA helicase TDRD9 Danio rerio
Q9H2U1 2.8e-69 256 31 12 575 1 DHX36 ATP-dependent DNA/RNA helicase DHX36 Homo sapiens
Q8VHK9 4.67e-68 253 29 13 622 1 Dhx36 ATP-dependent DNA/RNA helicase DHX36 Mus musculus
D4A2Z8 2.68e-67 250 29 13 622 1 Dhx36 ATP-dependent DNA/RNA helicase DHX36 Rattus norvegicus
Q8NDG6 2.76e-66 250 32 15 596 1 TDRD9 ATP-dependent RNA helicase TDRD9 Homo sapiens
P37024 2.6e-64 238 34 6 442 1 hrpB ATP-dependent RNA helicase HrpB Escherichia coli (strain K12)
Q7L7V1 5.05e-64 236 26 17 664 1 DHX32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 Homo sapiens
Q14BI7 1.22e-63 242 31 19 602 1 Tdrd9 ATP-dependent RNA helicase TDRD9 Mus musculus
Q3MHU3 1.65e-63 241 30 16 605 2 Tdrd9 ATP-dependent RNA helicase TDRD9 Rattus norvegicus
Q8BZS9 2.45e-63 234 26 19 665 1 Dhx32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 Mus musculus
Q06698 9.05e-63 239 28 13 610 1 YLR419W Putative ATP-dependent RNA helicase YLR419W Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q7Z478 1.69e-61 235 28 13 625 1 DHX29 ATP-dependent RNA helicase DHX29 Homo sapiens
B4LX81 2.49e-61 234 31 22 612 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila virilis
Q28141 1.92e-60 231 29 16 647 1 DHX9 ATP-dependent RNA helicase A Bos taurus
Q581T1 2.09e-60 232 34 15 563 1 REH2 RNA editing associated helicase 2 Trypanosoma brucei brucei (strain 927/4 GUTat10.1)
Q68FK8 5.05e-60 230 29 17 649 2 dhx9 ATP-dependent RNA helicase A protein Xenopus laevis
Q08211 8.35e-60 229 29 17 647 1 DHX9 ATP-dependent RNA helicase A Homo sapiens
Q5R874 8.47e-60 229 29 17 647 2 DHX9 ATP-dependent RNA helicase A Pongo abelii
P0C7L7 6.19e-59 227 32 19 628 3 UMAG_11114 Putative DEAH-box ATP-dependent helicase UM11114 Ustilago maydis (strain 521 / FGSC 9021)
Q296Q5 1.06e-58 226 32 15 506 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila pseudoobscura pseudoobscura
P24785 1.12e-58 226 31 12 563 1 mle Dosage compensation regulator mle Drosophila melanogaster
Q5XH12 2.38e-58 219 24 15 663 2 dhx32 Putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 Xenopus laevis
B4JT42 1.85e-57 222 31 20 543 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila grimshawi
Q7QCW2 1.88e-57 222 30 18 596 3 spn-E Probable ATP-dependent RNA helicase spindle-E Anopheles gambiae
O60114 3.06e-57 221 29 17 564 3 SPBC15C4.05 Uncharacterized helicase C15C4.05 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
O70133 5.06e-57 221 29 18 647 1 Dhx9 ATP-dependent RNA helicase A Mus musculus
Q16JS8 2.92e-56 218 32 20 554 3 spn-E Probable ATP-dependent RNA helicase spindle-E Aedes aegypti
B4GEU5 5.32e-56 218 31 16 508 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila persimilis
B4PRJ9 6.45e-56 217 32 20 542 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila yakuba
B4K5R2 1.13e-55 216 30 18 603 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila mojavensis
B3M383 2.96e-55 215 31 18 553 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila ananassae
B4NBB0 4.7e-55 214 31 20 568 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila willistoni
B3P3W1 3.15e-54 212 31 21 560 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila erecta
B0XDC4 3.79e-54 211 29 21 655 3 spn-E Probable ATP-dependent RNA helicase spindle-E Culex quinquefasciatus
Q924H9 9.11e-53 202 27 21 640 2 Dqx1 ATP-dependent RNA helicase DQX1 Mus musculus
B4HLH4 9.54e-53 207 31 21 541 3 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila sechellia
Q9VF26 7.77e-51 201 30 18 542 2 spn-E Probable ATP-dependent RNA helicase spindle-E Drosophila melanogaster
F4ILR7 2.12e-48 192 30 11 441 2 At2g35920 DExH-box ATP-dependent RNA helicase DExH1 Arabidopsis thaliana
F4ILR7 4.05e-39 162 43 1 188 2 At2g35920 DExH-box ATP-dependent RNA helicase DExH1 Arabidopsis thaliana
Q8TE96 1.57e-47 186 26 22 658 1 DQX1 ATP-dependent RNA helicase DQX1 Homo sapiens
Q6PGC1 5.26e-46 185 26 17 632 1 Dhx29 ATP-dependent RNA helicase DHX29 Mus musculus
Q3ZBE0 3.18e-44 176 25 20 635 2 DQX1 ATP-dependent RNA helicase DQX1 Bos taurus
Q5UQ96 1.09e-41 168 29 17 484 1 MIMI_L540 Putative ATP-dependent RNA helicase L540 Acanthamoeba polyphaga mimivirus
Q04217 6.77e-41 168 39 4 218 1 ECM16 Probable ATP-dependent RNA helicase DHR1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q04217 1.43e-36 154 38 8 259 1 ECM16 Probable ATP-dependent RNA helicase DHR1 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q8IY37 3e-40 166 29 12 461 1 DHX37 Probable ATP-dependent RNA helicase DHX37 Homo sapiens
Q8IY37 3.78e-36 153 36 7 247 1 DHX37 Probable ATP-dependent RNA helicase DHX37 Homo sapiens
F4HYJ7 5.41e-40 165 35 7 294 3 At1g48650 DExH-box ATP-dependent RNA helicase DExH3 Arabidopsis thaliana
F4HYJ7 1.2e-32 142 30 7 353 3 At1g48650 DExH-box ATP-dependent RNA helicase DExH3 Arabidopsis thaliana
Q1EHT7 5.19e-39 162 26 12 527 2 Os01g0256800 Zinc finger CCCH domain-containing protein 4 Oryza sativa subsp. japonica
P34305 1.54e-38 160 28 13 467 3 rha-2 Putative ATP-dependent RNA helicase rha-2 Caenorhabditis elegans
P34305 9.01e-33 142 34 5 245 3 rha-2 Putative ATP-dependent RNA helicase rha-2 Caenorhabditis elegans
Q9C813 5.03e-38 159 38 7 271 2 FAS4 ATP-dependent RNA helicase DEAH13 Arabidopsis thaliana
Q9C813 5.48e-32 139 27 11 466 2 FAS4 ATP-dependent RNA helicase DEAH13 Arabidopsis thaliana
F4IM84 1.09e-37 158 31 8 341 3 At2g01130 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial Arabidopsis thaliana
F4IM84 1.46e-36 154 44 1 189 3 At2g01130 DExH-box ATP-dependent RNA helicase DExH5, mitochondrial Arabidopsis thaliana
B2RR83 2.49e-37 157 39 2 220 1 Ythdc2 3'-5' RNA helicase YTHDC2 Mus musculus
B2RR83 1.19e-33 145 28 17 506 1 Ythdc2 3'-5' RNA helicase YTHDC2 Mus musculus
Q5R746 2.92e-37 157 39 2 220 2 YTHDC2 3'-5' RNA helicase YTHDC2 Pongo abelii
Q5R746 1.11e-33 145 28 17 506 2 YTHDC2 3'-5' RNA helicase YTHDC2 Pongo abelii
Q9H6S0 3.44e-37 157 39 2 220 1 YTHDC2 3'-5' RNA helicase YTHDC2 Homo sapiens
Q9H6S0 1.92e-33 144 28 17 503 1 YTHDC2 3'-5' RNA helicase YTHDC2 Homo sapiens
A3KMI0 2.05e-36 154 41 3 194 2 dhx29 ATP-dependent RNA helicase dhx29 Xenopus laevis
A3KMI0 4.61e-34 146 30 6 336 2 dhx29 ATP-dependent RNA helicase dhx29 Xenopus laevis
P0C9A2 3.09e-36 152 32 15 404 3 Pret-084 Putative RNA Helicase B962L African swine fever virus (isolate Tick/South Africa/Pretoriuskop Pr4/1996)
P0C9A3 4.03e-36 152 32 15 404 3 War-082 Putative RNA Helicase B962L African swine fever virus (isolate Warthog/Namibia/Wart80/1980)
Q89443 5.85e-36 152 32 15 404 2 Ba71V-072 Putative RNA helicase B962L African swine fever virus (strain Badajoz 1971 Vero-adapted)
Q8V9U2 6.85e-36 152 32 15 404 3 Mal-080 Putative RNA Helicase B962L African swine fever virus (isolate Tick/Malawi/Lil 20-1/1983)
O46072 1.23e-35 151 28 17 503 1 kz Probable ATP-dependent RNA helicase kurz Drosophila melanogaster
O46072 3.89e-35 150 35 5 244 1 kz Probable ATP-dependent RNA helicase kurz Drosophila melanogaster
F4INY4 4.88e-35 149 42 2 190 2 HVT1 DExH-box ATP-dependent RNA helicase DExH6 Arabidopsis thaliana
F4INY4 3.48e-25 117 27 10 359 2 HVT1 DExH-box ATP-dependent RNA helicase DExH6 Arabidopsis thaliana
P0C9A4 8.71e-35 148 32 15 404 3 Ken-084 Putative RNA Helicase B962L African swine fever virus (isolate Pig/Kenya/KEN-50/1950)
F4I9Q5 1.54e-34 148 38 8 264 2 At1g58060 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic Arabidopsis thaliana
F4I9Q5 1.03e-33 145 42 3 198 2 At1g58060 DExH-box ATP-dependent RNA helicase DExH7, chloroplastic Arabidopsis thaliana
F4IDQ6 4.84e-34 146 44 2 190 1 NIH DExH-box ATP-dependent RNA helicase DExH2 Arabidopsis thaliana
F4IDQ6 3.6e-30 134 28 10 335 1 NIH DExH-box ATP-dependent RNA helicase DExH2 Arabidopsis thaliana
O22243 6.13e-34 145 25 16 575 2 At2g47680 DExH-box ATP-dependent RNA helicase DExH8 Arabidopsis thaliana
Q6P158 4.39e-33 143 41 2 187 1 DHX57 Putative ATP-dependent RNA helicase DHX57 Homo sapiens
Q6P158 1.16e-28 129 28 12 356 1 DHX57 Putative ATP-dependent RNA helicase DHX57 Homo sapiens
Q9C6G0 2.17e-32 141 42 4 198 3 At1g58050 DExH-box ATP-dependent RNA helicase DExH4, chloroplastic Arabidopsis thaliana
Q9C6G0 3.24e-31 137 34 9 269 3 At1g58050 DExH-box ATP-dependent RNA helicase DExH4, chloroplastic Arabidopsis thaliana
Q6P5D3 9.32e-30 132 39 2 187 1 Dhx57 Putative ATP-dependent RNA helicase DHX57 Mus musculus
Q6P5D3 1.88e-28 128 28 12 354 1 Dhx57 Putative ATP-dependent RNA helicase DHX57 Mus musculus
Q5UR20 8.45e-29 129 25 11 483 3 MIMI_R366 Putative ATP-dependent RNA helicase R366 Acanthamoeba polyphaga mimivirus
Q22307 9.75e-27 122 37 5 196 2 rha-1 ATP-dependent RNA helicase A Caenorhabditis elegans
Q22307 9.21e-21 103 27 8 351 2 rha-1 ATP-dependent RNA helicase A Caenorhabditis elegans
Q9Q927 2.52e-10 68 24 13 349 2 OPG084 RNA helicase NPH-II Rabbit fibroma virus (strain Kasza)
Q9Q8Q2 1.04e-08 63 24 15 358 3 OPG084 RNA helicase NPH-II Myxoma virus (strain Lausanne)
Q9YW06 5.05e-08 61 23 14 360 3 NPH2 RNA helicase NPH-II Melanoplus sanguinipes entomopoxvirus
Q04574 7.77e-07 57 23 17 405 3 None Genome polyprotein 1 Barley yellow mosaic virus (isolate Germany)
Q96662 8.16e-07 57 25 16 328 1 None Genome polyprotein Bovine viral diarrhea virus (strain CP7)
P19711 8.38e-07 57 25 16 328 1 None Genome polyprotein Bovine viral diarrhea virus (isolate NADL)
P0DSU6 9.68e-07 57 23 14 355 2 OPG084 RNA helicase NPH-II Variola virus
P12927 1.32e-06 56 23 11 352 1 OPG084 RNA helicase NPH-II Vaccinia virus (strain Western Reserve)
Q9JFC3 1.38e-06 56 23 14 355 2 OPG084 RNA helicase NPH-II Vaccinia virus (strain Tian Tan)
Q01499 1.41e-06 57 25 17 328 1 None Genome polyprotein Bovine viral diarrhea virus (strain SD-1)
A0A7H0DN56 1.48e-06 56 23 14 355 3 OPG084 RNA helicase NPH-II Monkeypox virus
Q85197 1.6e-06 57 26 14 328 1 None Genome polyprotein Potato virus A
O57193 1.6e-06 56 23 13 355 2 OPG084 RNA helicase NPH-II Vaccinia virus (strain Ankara)
P20502 1.79e-06 56 23 13 355 2 OPG084 RNA helicase NPH-II Vaccinia virus (strain Copenhagen)
Q01206 3.57e-06 55 23 18 408 3 None Genome polyprotein 1 Barley yellow mosaic virus (strain Japanese II-1)
P21231 6.8e-06 54 22 11 320 1 None Genome polyprotein Soybean mosaic virus (strain N)
Q65730 1.75e-05 53 21 15 369 1 None Genome polyprotein Brome streak virus (strain 11-Cal)
Q9YJW3 3.19e-05 52 23 17 405 3 None Genome polyprotein 1 Barley yellow mosaic virus (isolate China/Yancheng/1998)
P19712 4.44e-05 52 24 16 328 1 None Genome polyprotein Classical swine fever virus (strain Alfort/Tuebingen)
P21530 5.03e-05 52 24 16 328 1 None Genome polyprotein Classical swine fever virus (strain Brescia)
Q6XW15 0.000115 50 23 10 324 3 None Genome polyprotein Beet mosaic virus
Q9W1I2 0.000234 49 21 18 430 1 bgcn Benign gonial cell neoplasm protein Drosophila melanogaster

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_01410
Feature type CDS
Gene hrpA
Product ATP-dependent RNA helicase HrpA
Location 262933 - 266904 (strand: 1)
Length 3972 (nucleotides) / 1323 (amino acids)

Contig

Accession ZDB_359
Length 392768 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_664
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00270 DEAD/DEAH box helicase
PF00271 Helicase conserved C-terminal domain
PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold
PF11898 Domain of unknown function (DUF3418)
PF21010 Helicase associated domain (HA2), ratchet-like

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1643 Translation, ribosomal structure and biogenesis (J) J HrpA-like RNA helicase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] - -

Protein Sequence

MTEGRPAAQKAKPYRRHDITYQKDSKVNSLLNELKQLIPHLSLREQHQFRKRLAGVAKIRNPESQQKVLAGLQDEMLHGITRTELRIANRPEITYPDNLPVSQKREAIYNAIRDNQVVIIAGETGSGKTTQIPKICLELGRGITGFIGHTQPRRLAARTVASRIADELKVPLGGAVGYKVRFSDQVSDNSLVKLMTDGILLAELQQDKLLLQYDTIIIDEAHERSLNIDFILGYLRQLLPKRPDLKVIITSATIDPERFSRHFGNAPIIEVSGRTYPVEVRYRPVMGEENDSDRDLTQGILDAVHELGRESAGDILIFMSGEREIRETADALNKADLRHTEVLPLFARLSNSEQNRIFQPHTGRRIVLATNVAETSLTVPGIKYVIDTGFARVSRYSYRTKVQRLPIEPISQASANQRKGRCGRVSDGICIRLYSEDDFLSRPEFTDPEILRTNLASVILQMTAIGLGDIAAFPFVEAPDKRNIQDGVKLLEELGAIDGKTSAEGHYHLTQTGRQLAKLPIDPRLARMVLEARNHGAVRETMVIAAALSIQDPRERPLEKQQASDEKHRRFADKESDFIAFVNLWNYLKEQQKVLSNSQLRKQCRQEFLNYLRIREWQDVYTQLRQVVKEQGIPVNSEPADYKSVHLSLLSGLLSHVGQKDTEKQEFTGARNARFSVFPGSGLFKKPPKWVMVAELVETSRLWGRIAAKIEPEWIEPLAPHLVKYHYSEPHWEKSQGAVMATEKVTLYGLPVVAGRPVNYGNIDPALCRELFIRHALVEGDWLTRHAFFRENQKLRNEVEELEHKSRRRDILVDDETLFSFYDTRLPPDIISSRHFDNWWKRERLQKPDFLNYEKNMLIRSDANQVTAQDYPNYWYQGDLKFRLSYQFEPGTEADGVTVHIPLPVLNQVSPEGFDWQIPGLREELVIALIKSLPKPVRRNFVPAPNYAGAFMERVPEPQGALLDALERELRRMTGVTVDRESWQLDQIPAHLKITFRITGDKQKKLAEGYDLEALKLSLKEQVQQTLSDVVDDGIEQSGAHIWRFGDIPGCYEQKRGGYAVKAYPALVDEKQSVGIKVFETEFEQQLAMQAGTRRLLLLNIPSPIKYLHEKLPNKAKLGLYFNPYGKVLDLIDDCIACGVDKLIAQYGGVVWQEDKFAQLQEFVRAELNETVVGIAKLVEQILTTTFAISKRLKGRIDMQMAFALSDIKAQMSGLVFPGFVTAHGWQRLPDILRYLQGIERRIEKLVSDVNRDRANMSKIEHVQNLWKQWQGKLSPVEKRRPEAEAVRWMIEELRISLFAQQLGTPYPVSDKRIIQAMEQISG

Flanking regions ( +/- flanking 50bp)

CAAGTTTAATAAAGACACGCGGTGTGCGTTACTCCGAAAACGGGATAACAATGACAGAGGGGAGACCCGCCGCACAAAAAGCCAAACCGTACAGACGGCACGATATTACCTATCAGAAGGACAGCAAGGTGAATTCCCTTCTTAATGAATTAAAACAGTTAATCCCCCATCTATCGCTGCGGGAGCAGCATCAGTTCCGCAAACGGCTGGCGGGGGTGGCGAAGATCCGCAACCCCGAATCTCAGCAGAAGGTGCTGGCAGGATTACAGGATGAGATGCTGCATGGTATAACCCGCACAGAGCTGCGCATTGCCAACCGGCCGGAGATTACCTATCCGGATAATCTGCCGGTCTCGCAGAAGCGCGAAGCGATTTATAACGCGATCCGCGATAATCAGGTGGTGATCATCGCGGGTGAAACCGGATCCGGGAAAACCACACAGATCCCGAAAATCTGTCTGGAGCTGGGACGCGGTATCACCGGGTTTATCGGTCACACCCAGCCGCGTCGTCTGGCTGCGCGGACTGTGGCCTCCCGTATTGCGGATGAACTGAAAGTCCCGCTTGGCGGGGCTGTCGGTTATAAAGTCCGCTTCAGTGATCAGGTCAGTGATAATTCTCTGGTTAAGCTGATGACGGACGGGATCCTGCTGGCAGAATTACAGCAGGACAAGCTGTTGCTGCAGTATGACACCATCATCATCGATGAAGCCCACGAACGCAGCCTGAATATTGATTTTATCCTCGGCTATCTGCGTCAGCTTCTGCCGAAACGTCCGGATCTGAAAGTGATCATCACCTCTGCGACCATTGATCCGGAGCGGTTTTCCCGTCATTTCGGTAATGCACCGATTATTGAAGTCTCCGGGCGTACCTATCCGGTGGAAGTCCGTTATCGTCCGGTGATGGGGGAAGAGAATGATTCGGATCGCGACCTGACTCAGGGCATTCTGGATGCCGTGCATGAACTGGGACGGGAAAGCGCGGGGGATATCCTTATCTTTATGAGCGGGGAGCGGGAGATCCGTGAAACCGCCGATGCCCTGAACAAAGCAGACTTGCGCCATACCGAAGTGCTGCCGCTGTTTGCCCGTCTTTCCAACAGCGAACAGAACCGGATTTTTCAGCCGCACACCGGCCGGCGCATCGTGCTGGCCACTAACGTGGCGGAAACCTCACTGACCGTTCCCGGTATCAAATATGTGATTGATACCGGTTTTGCCCGTGTCAGCCGCTACAGTTACCGGACAAAAGTTCAGCGTCTGCCGATAGAACCAATTTCGCAGGCCTCGGCAAACCAGCGCAAAGGGCGTTGCGGCCGCGTTTCTGACGGGATCTGCATCCGCCTCTATTCGGAGGATGATTTCCTGTCACGGCCGGAATTTACCGACCCGGAAATTCTGCGTACCAACCTGGCCTCCGTTATTCTGCAGATGACCGCGATCGGGCTGGGGGATATCGCCGCCTTCCCGTTTGTGGAAGCGCCGGATAAACGCAACATCCAGGATGGCGTCAAACTGCTGGAAGAACTGGGTGCTATCGACGGTAAAACCTCCGCCGAAGGGCATTATCATCTGACACAAACCGGCCGTCAGCTGGCGAAACTGCCGATTGACCCGCGCCTGGCGCGGATGGTGCTGGAAGCCCGTAACCACGGCGCGGTGCGGGAAACCATGGTGATCGCCGCCGCACTCTCCATCCAGGATCCCCGTGAGCGTCCGCTGGAGAAGCAGCAGGCGTCCGATGAAAAACACCGCCGCTTTGCGGATAAAGAATCTGATTTTATTGCCTTTGTGAATCTGTGGAACTATCTGAAAGAGCAGCAAAAAGTGTTATCTAACTCGCAACTGCGCAAACAGTGTCGTCAGGAGTTCCTTAACTATCTGCGGATCCGCGAATGGCAGGATGTGTATACCCAGCTGCGCCAGGTGGTGAAAGAGCAGGGTATTCCGGTGAACAGCGAACCGGCGGATTATAAAAGTGTGCATCTGTCACTCCTGAGTGGTCTGCTGTCCCATGTCGGGCAGAAAGACACGGAAAAACAGGAGTTCACCGGGGCGCGTAATGCGCGTTTCTCCGTCTTCCCGGGCTCCGGCCTATTTAAGAAGCCGCCGAAATGGGTAATGGTGGCGGAGCTGGTGGAAACCAGCCGGTTATGGGGGCGTATCGCTGCTAAAATCGAACCGGAATGGATAGAGCCGCTGGCACCGCATCTGGTGAAATATCACTACAGCGAACCGCACTGGGAGAAATCACAGGGTGCGGTGATGGCAACGGAAAAAGTGACTCTCTATGGCCTGCCGGTCGTGGCGGGACGTCCGGTGAACTACGGTAATATCGATCCGGCGCTGTGTCGCGAGCTCTTTATCCGCCATGCGCTGGTGGAAGGTGACTGGCTGACCCGTCATGCGTTCTTCCGGGAAAACCAGAAACTGCGTAACGAAGTGGAAGAGCTGGAACACAAATCCCGGCGCCGCGATATCCTTGTGGATGATGAAACTCTGTTCAGTTTCTACGATACCCGTCTGCCGCCGGATATTATCTCGTCACGCCACTTTGATAACTGGTGGAAACGGGAACGGCTGCAGAAACCGGATTTTCTCAATTATGAGAAAAACATGCTGATCCGCTCTGATGCTAATCAGGTAACTGCACAGGATTATCCGAACTACTGGTATCAGGGGGATCTGAAATTCCGCCTGAGCTATCAGTTTGAACCCGGAACCGAAGCGGACGGTGTGACCGTACATATTCCGCTGCCGGTACTGAATCAGGTCAGTCCGGAAGGGTTTGACTGGCAAATCCCGGGGCTGCGTGAAGAGTTGGTTATTGCGCTGATTAAATCGCTGCCAAAACCGGTACGCCGTAATTTTGTGCCTGCACCAAACTACGCGGGCGCATTTATGGAGCGGGTACCTGAGCCGCAGGGCGCACTGCTGGATGCGCTGGAGCGGGAACTGCGCCGTATGACCGGCGTCACGGTTGATCGCGAATCCTGGCAGTTGGATCAAATTCCGGCACATCTGAAAATCACCTTCCGTATCACGGGGGATAAACAGAAAAAACTGGCGGAAGGTTACGATCTGGAAGCACTGAAACTGAGCCTGAAAGAGCAGGTGCAACAGACACTGTCTGATGTGGTCGATGACGGTATCGAGCAAAGCGGTGCTCATATCTGGCGTTTCGGCGATATTCCCGGCTGTTATGAGCAAAAGCGCGGAGGTTATGCGGTGAAAGCTTACCCGGCGCTGGTGGATGAAAAGCAGAGTGTCGGGATTAAGGTCTTTGAAACGGAATTTGAGCAGCAACTGGCGATGCAGGCGGGAACGCGGCGCTTACTGCTGCTGAATATCCCGTCGCCAATCAAATATCTGCATGAGAAATTACCGAACAAAGCCAAACTGGGGCTGTATTTTAACCCGTACGGCAAAGTGCTGGATTTGATTGATGACTGTATCGCCTGTGGCGTCGACAAGCTGATCGCACAATACGGCGGCGTGGTCTGGCAGGAAGATAAATTCGCGCAGTTACAGGAGTTTGTCCGGGCTGAGCTGAACGAAACCGTTGTCGGTATCGCGAAGCTGGTGGAGCAGATCCTGACCACCACATTTGCCATCAGTAAACGCCTGAAAGGGCGGATTGATATGCAGATGGCGTTTGCGCTCTCTGACATCAAAGCACAAATGAGCGGACTGGTCTTCCCGGGCTTTGTAACGGCTCACGGCTGGCAGCGTCTGCCGGATATCCTGCGCTATTTACAGGGGATAGAGCGGCGCATCGAAAAACTGGTATCTGACGTTAACCGCGACAGGGCGAATATGAGTAAAATTGAGCATGTTCAGAACCTGTGGAAGCAGTGGCAGGGTAAGTTATCACCGGTGGAGAAACGCAGACCGGAAGCGGAGGCTGTGCGCTGGATGATAGAAGAGTTGCGTATCAGTCTGTTCGCCCAGCAACTGGGAACGCCGTATCCGGTTTCTGATAAACGGATTATTCAGGCAATGGAACAAATCAGCGGGTAAAGTGCCGTTTTTACGGTATACTGTTTATTTATCCAGTATCGATGATTATA