Homologs in group_2339

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_18540 FBDBKF_18540 100.0 Morganella morganii S1 - Exodeoxyribonuclease VIII
EHELCC_01845 EHELCC_01845 100.0 Morganella morganii S2 - Exodeoxyribonuclease VIII
NLDBIP_01615 NLDBIP_01615 100.0 Morganella morganii S4 - Exodeoxyribonuclease VIII
HKOGLL_00460 HKOGLL_00460 100.0 Morganella morganii S5 - Exodeoxyribonuclease VIII
F4V73_RS06300 F4V73_RS06300 31.0 Morganella psychrotolerans - PD-(D/E)XK nuclease-like domain-containing protein
PMI_RS02330 PMI_RS02330 31.9 Proteus mirabilis HI4320 - PD-(D/E)XK nuclease-like domain-containing protein

Distribution of the homologs in the orthogroup group_2339

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2339

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P15032 6.31e-06 53 37 2 77 1 recE Exodeoxyribonuclease 8 Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_00420
Feature type CDS
Gene -
Product Exodeoxyribonuclease VIII
Location 70503 - 72200 (strand: -1)
Length 1698 (nucleotides) / 565 (amino acids)

Contig

Accession ZDB_359
Length 392768 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2339
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF12684 PDDEXK-like domain of unknown function (DUF3799)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K10906 exodeoxyribonuclease VIII [EC:3.1.11.-] - -

Protein Sequence

MATTNKERMDANLAAAIMLASGEACIDIAKATTDLIARINGDKSNPALEKYDNIIFRVGLAATSSTCLQSLPDEQCIEALAHVIRNMDKYPATSDKKQYFESLCGAADHSAAKNDKQPVYQNDEVMTDNDCQAATEPPHFEPGRYPDIPNETYHTSNGISSTMLKDARISLMYYQRRHITKVIQHERSEALDFGSLFHTLVLEPEKLDAEFSLPPVIPADALTNTESMKKWIESYNAGLAPVMSNDELKAEIEAHNATLPQPLSLSGNAEEIGSLYVSLPDAFRTIPEHEKRTAAAMKACIKMFNNTLPVPLKTSGGRIDMIRELEAINPELAEAERSKPDPLITSGKKEDLIARIKAVSPDTVFADELMQAWQADESRIRITGDQLKLGKSMQEAVYQHPEIRPLINHPGRAVEVSYYGIDEDTGLEVRVRPDLEISTTDSRIGFDLKSVSLGRFKQDAIEAMIRREILNRDYHVSAAMYCDIAELDQFFWIFVNKDENYNWVAVVEASPDLLELGRLEYKKTLRDIRQAMDTDVWPGPVTTTLTIGLSDFDMRRLESLQMDAA

Flanking regions ( +/- flanking 50bp)

TTTCACCACAAAAACCGCCGCACGGACAGATCAACTTATAGGTGAGCACAATGGCAACAACCAATAAAGAACGTATGGATGCTAATTTAGCCGCGGCGATAATGCTGGCCAGCGGCGAGGCATGTATTGATATAGCGAAAGCAACGACAGACCTGATTGCCCGTATCAACGGAGATAAATCTAACCCAGCGCTGGAGAAATACGACAACATTATTTTCCGTGTCGGCCTCGCGGCCACATCATCAACCTGCTTACAGTCACTGCCGGATGAGCAATGCATTGAAGCGCTGGCACACGTCATCAGAAATATGGATAAGTACCCGGCCACCAGCGACAAAAAGCAGTATTTTGAATCGCTGTGCGGGGCCGCTGATCATTCTGCCGCAAAAAATGATAAACAACCCGTTTATCAAAACGATGAGGTGATGACCGATAATGACTGTCAGGCAGCCACTGAGCCGCCACATTTTGAACCGGGCCGCTATCCTGATATCCCTAACGAAACGTATCACACATCGAACGGCATCAGCAGCACCATGCTGAAAGATGCACGGATCAGCCTGATGTATTACCAGCGCCGCCACATCACGAAAGTGATTCAGCATGAACGCTCTGAGGCGTTGGATTTCGGTAGCCTGTTTCATACTCTGGTACTGGAACCGGAAAAGCTGGACGCAGAATTCAGCCTGCCGCCGGTTATCCCGGCTGACGCGCTGACCAATACCGAATCCATGAAGAAATGGATTGAGAGTTATAACGCCGGTCTGGCGCCAGTGATGAGTAACGACGAGCTGAAAGCAGAAATTGAGGCACATAACGCCACGCTTCCGCAGCCGTTATCTCTGTCCGGTAACGCTGAAGAAATCGGTTCTCTCTATGTTTCGCTACCTGATGCTTTCCGCACCATTCCGGAACATGAAAAGCGCACCGCAGCAGCAATGAAAGCCTGCATCAAAATGTTCAATAACACCCTGCCGGTACCGCTGAAAACATCCGGCGGACGTATCGATATGATTCGGGAGCTGGAAGCGATAAACCCTGAGCTGGCGGAAGCAGAACGCAGTAAGCCGGACCCACTGATCACCTCGGGTAAGAAAGAGGACCTTATCGCCAGAATCAAAGCCGTATCGCCGGACACTGTTTTCGCTGATGAGTTAATGCAGGCATGGCAGGCAGATGAATCACGTATCCGTATCACAGGCGATCAGTTAAAGCTCGGCAAATCCATGCAGGAAGCTGTTTACCAGCACCCTGAAATCAGACCGCTGATTAATCATCCGGGCCGGGCCGTGGAAGTCAGTTATTACGGCATTGATGAAGATACAGGTCTTGAAGTTCGCGTCCGGCCAGACCTTGAAATATCCACCACGGATAGCCGTATCGGGTTCGACCTGAAATCGGTATCACTCGGACGTTTCAAGCAGGATGCCATCGAAGCCATGATCCGCCGGGAAATACTCAACCGCGATTATCACGTCAGCGCGGCCATGTACTGCGATATTGCCGAACTCGACCAGTTCTTCTGGATCTTCGTTAACAAAGACGAAAATTACAACTGGGTCGCGGTGGTCGAAGCTTCGCCGGATTTACTGGAACTCGGCCGCCTGGAATACAAAAAGACACTTCGCGATATCCGCCAGGCTATGGACACCGATGTATGGCCGGGCCCGGTCACCACCACGCTCACTATCGGCCTGAGCGATTTCGATATGCGCCGCCTGGAATCGCTGCAAATGGACGCAGCGTAACACCCACCCTGTTTGATGCCCGGCAATGGTCGGGCTGGAGATTTTACTAT