Homologs in group_2242

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17160 FBDBKF_17160 100.0 Morganella morganii S1 hipB Transcriptional regulator, contains XRE-family HTH domain
EHELCC_01730 EHELCC_01730 100.0 Morganella morganii S2 hipB Transcriptional regulator, contains XRE-family HTH domain
NLDBIP_01730 NLDBIP_01730 100.0 Morganella morganii S4 hipB Transcriptional regulator, contains XRE-family HTH domain
HKOGLL_00345 HKOGLL_00345 100.0 Morganella morganii S5 hipB Transcriptional regulator, contains XRE-family HTH domain
F4V73_RS05915 F4V73_RS05915 91.9 Morganella psychrotolerans - XRE family transcriptional regulator
PMI_RS08320 PMI_RS08320 63.6 Proteus mirabilis HI4320 - XRE family transcriptional regulator

Distribution of the homologs in the orthogroup group_2242

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2242

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77626 6.92e-14 69 24 2 165 1 sutR HTH-type transcriptional regulator SutR Escherichia coli (strain K12)
C1CYP4 0.000282 42 43 0 58 1 ddrOC HTH-type transcriptional regulator DdrOC Deinococcus deserti (strain DSM 17065 / CIP 109153 / LMG 22923 / VCD115)
C1D3U5 0.000851 41 39 0 61 1 ddrOP3 HTH-type transcriptional regulator DdrOP3 Deinococcus deserti (strain DSM 17065 / CIP 109153 / LMG 22923 / VCD115)

  • Number of RefSeq hits:

General

Source Morganella morganii S3
Locus tag LHKJJB_00305
Feature type CDS
Gene hipB
Product Transcriptional regulator, contains XRE-family HTH domain
Location 51445 - 52002 (strand: -1)
Length 558 (nucleotides) / 185 (amino acids)

Contig

Accession ZDB_359
Length 392768 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2242
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01381 Helix-turn-helix

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1396 Transcription (K) K Transcriptional regulator, contains XRE-family HTH domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K23779 XRE family transcriptional regulator, regulator of sulfur utilization - -

Protein Sequence

MDSPITPPLQIMAVRLTEERQRQGRSIADVARSAGIAKSTLSQLESAQGNPGIETLWSLCVALNIPFASLFETPKSRVTVLRRGEGIQVSAENAYYHAFLLSSASAVNRRDLYTITAQPGKDRVSEPHMAQVTEHILLMTGSAIVGTLDEPATLLPGDYISYPGDVPHIFKALEPDTTAVMIIEH

Flanking regions ( +/- flanking 50bp)

GCAAGTGTTAATTCCGGGTTATTTCCGTTAACCAGCAGAGAGTGTATTTTATGGATTCACCTATCACCCCGCCCCTGCAGATCATGGCTGTCAGGCTGACCGAAGAGCGTCAGCGCCAGGGACGTTCTATCGCTGATGTCGCACGCAGTGCCGGTATTGCAAAATCCACACTGTCGCAGCTGGAATCGGCACAGGGAAATCCGGGAATCGAAACACTGTGGTCGCTCTGCGTGGCGCTGAATATCCCGTTTGCCAGTCTGTTTGAAACCCCGAAAAGCCGGGTAACCGTGCTGCGGCGCGGGGAAGGCATTCAGGTCAGTGCCGAGAATGCGTATTACCACGCTTTTCTGCTCTCTTCCGCTTCTGCGGTTAACCGCCGTGACCTGTACACCATCACAGCCCAGCCCGGCAAAGACCGCGTGTCTGAGCCGCATATGGCACAGGTTACCGAACATATCCTGCTGATGACCGGCAGTGCCATCGTCGGTACCCTTGATGAACCCGCCACACTTTTGCCCGGCGACTATATTTCCTACCCCGGCGATGTCCCGCATATTTTTAAGGCGCTGGAGCCAGATACCACGGCAGTCATGATTATTGAGCACTGATTTTACGCATTTGGTATTCACAAATACTTACTTATCGCAAATAATGTAAA