Homologs in group_289

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7 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_07000 FBDBKF_07000 43.3 Morganella morganii S1 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
EHELCC_03970 EHELCC_03970 43.3 Morganella morganii S2 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
NLDBIP_03970 NLDBIP_03970 43.3 Morganella morganii S4 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
LHKJJB_09800 LHKJJB_09800 43.3 Morganella morganii S3 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
HKOGLL_09175 HKOGLL_09175 43.3 Morganella morganii S5 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
F4V73_RS01190 F4V73_RS01190 46.7 Morganella psychrotolerans rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC
PMI_RS03335 PMI_RS03335 40.0 Proteus mirabilis HI4320 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC

Distribution of the homologs in the orthogroup group_289

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_289

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8NVT4 1.62e-42 145 95 0 70 3 MW1838 Uncharacterized RNA methyltransferase MW1838 Staphylococcus aureus (strain MW2)
Q6G836 1.62e-42 145 95 0 70 3 SAS1819 Uncharacterized RNA methyltransferase SAS1819 Staphylococcus aureus (strain MSSA476)
Q6GFG0 1.86e-42 145 95 0 70 3 SAR1988 Uncharacterized RNA methyltransferase SAR1988 Staphylococcus aureus (strain MRSA252)
Q99SY9 3.15e-42 144 94 0 70 3 SAV1897 Uncharacterized RNA methyltransferase SAV1897 Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q7A4Q9 3.15e-42 144 94 0 70 3 SA1713 Uncharacterized RNA methyltransferase SA1713 Staphylococcus aureus (strain N315)
Q5HEM5 5.26e-41 141 94 0 70 3 SACOL1957 Uncharacterized RNA methyltransferase SACOL1957 Staphylococcus aureus (strain COL)
Q8CRU6 1.73e-32 119 78 0 70 3 SE_1582 Uncharacterized RNA methyltransferase SE_1582 Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200)
Q5HN37 2.46e-31 115 77 0 70 3 SERP1435 Uncharacterized RNA methyltransferase SERP1435 Staphylococcus epidermidis (strain ATCC 35984 / DSM 28319 / BCRC 17069 / CCUG 31568 / BM 3577 / RP62A)
Q92AQ7 8.04e-23 92 62 0 70 3 lin1863 Uncharacterized RNA methyltransferase lin1863 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q8Y6D6 1.26e-22 92 62 0 70 3 lmo1751 Uncharacterized RNA methyltransferase lmo1751 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q71YR7 1.96e-22 91 62 0 70 3 LMOf2365_1776 Uncharacterized RNA methyltransferase LMOf2365_1776 Listeria monocytogenes serotype 4b (strain F2365)
Q88XP4 5.18e-22 90 59 0 67 3 lp_1151 Uncharacterized RNA methyltransferase lp_1151 Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Q8ES75 7.24e-22 90 61 0 67 3 OB0768 Uncharacterized RNA methyltransferase OB0768 Oceanobacillus iheyensis (strain DSM 14371 / CIP 107618 / JCM 11309 / KCTC 3954 / HTE831)
Q9KF10 2.03e-21 88 57 0 70 3 BH0687 Uncharacterized RNA methyltransferase BH0687 Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q9CGB9 2.23e-20 85 52 0 68 3 yljE Uncharacterized RNA methyltransferase YljE Lactococcus lactis subsp. lactis (strain IL1403)
O31503 1.69e-19 83 55 0 70 1 rlmCD 23S rRNA (uracil-C(5))-methyltransferase RlmCD Bacillus subtilis (strain 168)
Q97R12 6.03e-19 82 47 0 70 1 SP_1029 Uncharacterized RNA methyltransferase SP_1029 Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q73EJ5 8.54e-19 81 54 0 70 3 BCE_0363 Uncharacterized RNA methyltransferase BCE_0363 Bacillus cereus (strain ATCC 10987 / NRS 248)
Q81ZD6 9.67e-19 81 54 0 70 3 BA_0333 Uncharacterized RNA methyltransferase BA_0333/GBAA_0333/BAS0318 Bacillus anthracis
Q8E0T7 1.23e-18 80 51 0 70 3 SAG0633 Uncharacterized RNA methyltransferase SAG0633 Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
Q8E6F5 1.23e-18 80 51 0 70 3 gbs0613 Uncharacterized RNA methyltransferase gbs0613 Streptococcus agalactiae serotype III (strain NEM316)
Q814A6 1.57e-18 80 54 0 70 3 BC_0364 Uncharacterized RNA methyltransferase BC_0364 Bacillus cereus (strain ATCC 14579 / DSM 31 / CCUG 7414 / JCM 2152 / NBRC 15305 / NCIMB 9373 / NCTC 2599 / NRRL B-3711)
Q97LN4 7.98e-18 78 52 0 70 3 CA_C0523 Uncharacterized RNA methyltransferase CA_C0523 Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q8DPY7 1.63e-17 77 45 0 70 3 spr0932 Uncharacterized RNA methyltransferase spr0932 Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Q891A0 4.04e-17 76 50 0 70 3 CTC_02481 Uncharacterized RNA methyltransferase CTC_02481 Clostridium tetani (strain Massachusetts / E88)
Q8DUV4 7.71e-17 75 46 0 69 3 SMU_788 Uncharacterized RNA methyltransferase SMU_788 Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Q837V0 8.32e-17 75 48 0 70 3 EF_0728 Uncharacterized RNA methyltransferase EF_0728 Enterococcus faecalis (strain ATCC 700802 / V583)
Q99Z86 2.74e-16 74 49 0 69 3 SPy_1346 Uncharacterized RNA methyltransferase SPy_1346/M5005_Spy1098 Streptococcus pyogenes serotype M1
Q8P0H4 3.46e-16 73 49 0 69 3 spyM18_1360 Uncharacterized RNA methyltransferase spyM18_1360 Streptococcus pyogenes serotype M18 (strain MGAS8232)
Q8XNG6 3.84e-16 73 51 0 70 3 CPE0367 Uncharacterized RNA methyltransferase CPE0367 Clostridium perfringens (strain 13 / Type A)
Q92AV4 6.33e-16 73 44 0 70 3 lin1815 Uncharacterized RNA methyltransferase lin1815 Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262)
Q74I68 9.5e-16 72 50 0 66 3 LJ_1698 Uncharacterized RNA methyltransferase LJ_1698 Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)
Q8Y6I1 1.11e-15 72 44 0 70 3 lmo1703 Uncharacterized RNA methyltransferase lmo1703 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
Q71YW4 1.47e-15 72 44 0 70 3 LMOf2365_1727 Uncharacterized RNA methyltransferase LMOf2365_1727 Listeria monocytogenes serotype 4b (strain F2365)
Q5XBK8 1.55e-15 72 47 0 69 3 M6_Spy1070 Uncharacterized RNA methyltransferase M6_Spy1070 Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
P0DG15 1.55e-15 72 47 0 69 3 SPs0836 Uncharacterized RNA methyltransferase SPs0836 Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DG14 1.55e-15 72 47 0 69 3 SpyM3_1024 Uncharacterized RNA methyltransferase SpyM3_1024 Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
Q99YP3 3.24e-15 71 45 0 70 3 SPy_1606 Uncharacterized RNA methyltransferase SPy_1606/M5005_Spy1319 Streptococcus pyogenes serotype M1
Q81Z48 5.68e-15 70 45 0 70 3 BA_0426 Uncharacterized RNA methyltransferase BA_0426/GBAA_0426/BAS0414 Bacillus anthracis
Q73E18 6.39e-15 70 45 0 70 3 BCE_0542 Uncharacterized RNA methyltransferase BCE_0542 Bacillus cereus (strain ATCC 10987 / NRS 248)
Q8R918 8.05e-15 70 46 0 69 3 TTE1812 Uncharacterized RNA methyltransferase TTE1812 Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
P0DG17 8.13e-15 70 44 0 70 3 SPs0562 Uncharacterized RNA methyltransferase SPs0562 Streptococcus pyogenes serotype M3 (strain SSI-1)
P0DG16 8.13e-15 70 44 0 70 3 SpyM3_1299 Uncharacterized RNA methyltransferase SpyM3_1299 Streptococcus pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
Q5XAU1 1.06e-14 69 44 0 70 3 M6_Spy1337 Uncharacterized RNA methyltransferase M6_Spy1337 Streptococcus pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
Q8P017 8.85e-14 67 42 0 70 3 spyM18_1615 Uncharacterized RNA methyltransferase spyM18_1615 Streptococcus pyogenes serotype M18 (strain MGAS8232)
O31545 1.22e-13 67 42 0 70 3 yfjO Uncharacterized RNA methyltransferase YfjO Bacillus subtilis (strain 168)
Q97NV8 1.65e-13 66 41 0 70 3 SP_1901 Uncharacterized RNA methyltransferase SP_1901 Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
Q8DNH6 1.65e-13 66 41 0 70 3 spr1717 Uncharacterized RNA methyltransferase spr1717 Streptococcus pneumoniae (strain ATCC BAA-255 / R6)
Q830R6 2.07e-13 66 41 0 70 3 EF_2706 Uncharacterized RNA methyltransferase EF_2706 Enterococcus faecalis (strain ATCC 700802 / V583)
Q9KEF5 2.98e-13 65 42 0 70 3 BH0897 Uncharacterized RNA methyltransferase BH0897 Halalkalibacterium halodurans (strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153 / C-125)
Q8E1E4 6.31e-13 64 40 0 69 3 SAG0413 Uncharacterized RNA methyltransferase SAG0413 Streptococcus agalactiae serotype V (strain ATCC BAA-611 / 2603 V/R)
Q8E6W1 7.53e-13 64 42 0 69 3 gbs0448 Uncharacterized RNA methyltransferase gbs0448 Streptococcus agalactiae serotype III (strain NEM316)
Q892Z2 7.54e-13 64 43 1 69 3 CTC_01941 Uncharacterized RNA methyltransferase CTC_01941 Clostridium tetani (strain Massachusetts / E88)
Q74D67 2.89e-12 62 41 0 67 3 GSU1452 Uncharacterized RNA methyltransferase GSU1452 Geobacter sulfurreducens (strain ATCC 51573 / DSM 12127 / PCA)
Q8DSK3 1.91e-11 60 43 0 69 3 SMU_1779c Uncharacterized RNA methyltransferase SMU_1779c Streptococcus mutans serotype c (strain ATCC 700610 / UA159)
Q8R933 2.32e-11 60 40 1 69 3 TTE1797 Uncharacterized RNA methyltransferase TTE1797 Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4)
Q8AA22 7.54e-10 56 40 1 66 3 BT_0643 Uncharacterized RNA methyltransferase BT_0643 Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
Q97J51 1.04e-09 55 39 1 61 3 CA_C1435 Uncharacterized RNA methyltransferase CA_C1435 Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q7MVG9 1.21e-09 55 39 1 71 3 PG_1095 Uncharacterized RNA methyltransferase PG_1095 Porphyromonas gingivalis (strain ATCC BAA-308 / W83)
Q8YR05 1.4e-09 55 40 1 67 3 alr3654 Uncharacterized RNA methyltransferase alr3654 Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576)
Q72DK5 2.11e-09 54 41 1 68 3 DVU_0924 Uncharacterized RNA methyltransferase DVU_0924 Nitratidesulfovibrio vulgaris (strain ATCC 29579 / DSM 644 / CCUG 34227 / NCIMB 8303 / VKM B-1760 / Hildenborough)
Q74IG2 2.17e-09 54 34 0 67 3 LJ_1606 Uncharacterized RNA methyltransferase LJ_1606 Lactobacillus johnsonii (strain CNCM I-12250 / La1 / NCC 533)
Q8DKB7 4.22e-09 53 44 2 67 3 tlr0942 Uncharacterized RNA methyltransferase tlr0942 Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1)
Q88SY9 5.46e-09 53 42 0 70 3 lp_3226 Uncharacterized RNA methyltransferase lp_3226 Lactiplantibacillus plantarum (strain ATCC BAA-793 / NCIMB 8826 / WCFS1)
Q7NGN4 6.12e-09 53 40 1 70 3 gll3134 Uncharacterized RNA methyltransferase gll3134 Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
Q9CDP0 1.16e-08 52 35 0 70 3 ywfF Uncharacterized RNA methyltransferase YwfF Lactococcus lactis subsp. lactis (strain IL1403)
Q7V7K6 4.78e-08 50 39 2 68 3 PMT_0737 Uncharacterized RNA methyltransferase PMT_0737 Prochlorococcus marinus (strain MIT 9313)
Q8R5Z8 8.86e-08 50 34 0 70 3 FN1713 Uncharacterized RNA methyltransferase FN1713 Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / DSM 15643 / BCRC 10681 / CIP 101130 / JCM 8532 / KCTC 2640 / LMG 13131 / VPI 4355)
Q09833 1.31e-07 49 36 1 63 3 SPAC4G8.07c tRNA (uracil(54)-C(5))-methyltransferase Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q8BNV1 1.38e-07 49 36 1 71 1 Trmt2a tRNA (uracil-5-)-methyltransferase homolog A Mus musculus
P73374 1.71e-07 49 36 1 66 3 sll1967 Uncharacterized RNA methyltransferase sll1967 Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
P33753 4.02e-07 48 39 1 61 1 TRM2 tRNA (uracil(54)-C(5))-methyltransferase Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Q6MAY1 5.1e-07 48 37 1 69 3 pc1544 Uncharacterized RNA methyltransferase pc1544 Protochlamydia amoebophila (strain UWE25)
Q8IZ69 6.49e-07 47 36 1 71 1 TRMT2A tRNA (uracil-5-)-methyltransferase homolog A Homo sapiens
P55137 7.13e-07 47 32 2 75 3 CT_742 Uncharacterized RNA methyltransferase CT_742 Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9Z721 7.35e-07 47 31 0 70 3 CPn_0885 Uncharacterized RNA methyltransferase CPn_0885/CP_0981/CPj0885/CpB0914 Chlamydia pneumoniae
Q821Q5 8.19e-07 47 35 0 70 3 CCA_00883 Uncharacterized RNA methyltransferase CCA_00883 Chlamydia caviae (strain ATCC VR-813 / DSM 19441 / 03DC25 / GPIC)
B5XV15 1.63e-06 46 38 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Klebsiella pneumoniae (strain 342)
Q87LP5 1.73e-06 46 41 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q32CD0 1.82e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Shigella dysenteriae serotype 1 (strain Sd197)
Q0T1Q1 1.86e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Shigella flexneri serotype 5b (strain 8401)
A1S4D3 1.99e-06 46 38 1 71 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
Q83QD5 2.07e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Shigella flexneri
Q31XK5 2.07e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Shigella boydii serotype 4 (strain Sb227)
P55135 2.07e-06 46 40 2 67 1 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Escherichia coli (strain K12)
Q3YY71 2.09e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Shigella sonnei (strain Ss046)
Q8FEG6 2.23e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TE74 2.23e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Escherichia coli O6:K15:H31 (strain 536 / UPEC)
Q1R7Q7 2.35e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Escherichia coli (strain UTI89 / UPEC)
A1AEX2 2.35e-06 46 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Escherichia coli O1:K1 / APEC
P58106 3.23e-06 45 32 2 70 3 TC_0118 Uncharacterized RNA methyltransferase TC_0118 Chlamydia muridarum (strain MoPn / Nigg)
Q8XED8 3.37e-06 45 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Escherichia coli O157:H7
O58994 3.57e-06 45 39 2 68 3 PH1259 23S rRNA (uracil(747)-C(5))-methyltransferase Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
A5EXH9 4.84e-06 45 34 2 82 3 trmA tRNA/tmRNA (uracil-C(5))-methyltransferase Dichelobacter nodosus (strain VCS1703A)
Q8KGF9 5.49e-06 45 35 1 71 3 CT0009 Uncharacterized RNA methyltransferase CT0009 Chlorobaculum tepidum (strain ATCC 49652 / DSM 12025 / NBRC 103806 / TLS)
A7MTS9 6.26e-06 45 39 2 68 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Vibrio campbellii (strain ATCC BAA-1116)
A6TD57 6.44e-06 45 38 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
Q7VNM5 7.28e-06 44 37 1 61 5 rlmC Putative 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC Haemophilus ducreyi (strain 35000HP / ATCC 700724)
Q74N58 7.93e-06 44 37 2 69 3 NEQ053 Uncharacterized RNA methyltransferase NEQ053 Nanoarchaeum equitans (strain Kin4-M)
A6VUQ2 1.15e-05 44 39 2 71 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Marinomonas sp. (strain MWYL1)
Q8XIK5 1.79e-05 43 41 1 68 3 CPE2114 Uncharacterized RNA methyltransferase CPE2114 Clostridium perfringens (strain 13 / Type A)
A4WDX1 3.95e-05 42 40 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Enterobacter sp. (strain 638)
B0BQ52 4.17e-05 42 39 1 61 3 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC Actinobacillus pleuropneumoniae serotype 3 (strain JL03)
A8ANZ1 4.23e-05 42 37 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
A0KKF0 4.38e-05 42 34 1 61 3 rlmI Ribosomal RNA large subunit methyltransferase I Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049)
A4SML8 5.28e-05 42 32 1 61 3 rlmI Ribosomal RNA large subunit methyltransferase I Aeromonas salmonicida (strain A449)
Q5PEJ4 7.19e-05 42 37 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Salmonella paratyphi A (strain ATCC 9150 / SARB42)
Q8ZME1 7.48e-05 42 37 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q57KF9 7.7e-05 42 37 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Salmonella choleraesuis (strain SC-B67)
Q6D178 7.8e-05 42 37 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
C6C5A0 0.000101 41 30 2 81 3 trmA tRNA/tmRNA (uracil-C(5))-methyltransferase Musicola paradisiaca (strain Ech703)
C6DDJ9 0.000106 41 37 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Pectobacterium carotovorum subsp. carotovorum (strain PC1)
B9LA97 0.000113 41 37 2 67 3 trmA tRNA/tmRNA (uracil-C(5))-methyltransferase Nautilia profundicola (strain ATCC BAA-1463 / DSM 18972 / AmH)
Q9CJX3 0.000144 41 31 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Pasteurella multocida (strain Pm70)
A1S1Z8 0.000158 40 29 1 81 3 trmA tRNA/tmRNA (uracil-C(5))-methyltransferase Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
A7MQZ8 0.000172 40 37 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Cronobacter sakazakii (strain ATCC BAA-894)
C4L7I7 0.000207 40 34 1 61 3 rlmI Ribosomal RNA large subunit methyltransferase I Tolumonas auensis (strain DSM 9187 / NBRC 110442 / TA 4)
F6CY50 0.000216 40 35 2 71 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Marinomonas posidonica (strain CECT 7376 / NCIMB 14433 / IVIA-Po-181)
A1S382 0.000223 40 31 1 63 3 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC Shewanella amazonensis (strain ATCC BAA-1098 / SB2B)
C5B8X6 0.000229 40 37 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Edwardsiella ictaluri (strain 93-146)
Q3IDM6 0.000239 40 38 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Pseudoalteromonas translucida (strain TAC 125)
Q47WQ1 0.000249 40 33 1 69 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Colwellia psychrerythraea (strain 34H / ATCC BAA-681)
Q5RFM7 0.000254 40 32 2 73 2 TRMT2B tRNA (uracil-5-)-methyltransferase homolog B Pongo abelii
Q086B4 0.000269 40 36 2 73 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Shewanella frigidimarina (strain NCIMB 400)
Q7MHP7 0.000279 40 35 0 65 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Vibrio vulnificus (strain YJ016)
Q6KHE2 0.00031 40 35 1 70 3 MMOB5020 Uncharacterized RNA methyltransferase MMOB5020 Mycoplasma mobile (strain ATCC 43663 / 163K / NCTC 11711)
Q96GJ1 0.000316 40 32 2 73 1 TRMT2B tRNA (uracil-5-)-methyltransferase homolog B Homo sapiens
A4QP75 0.000325 40 33 2 68 2 trmt2b tRNA (uracil-5-)-methyltransferase homolog B Danio rerio
Q8L7S3 0.000342 40 43 0 44 1 At2g28450 Zinc finger CCCH domain-containing protein 24 Arabidopsis thaliana
Q8DC67 0.00035 40 35 0 65 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Vibrio vulnificus (strain CMCP6)
A3N1B8 0.000418 39 36 1 61 3 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC Actinobacillus pleuropneumoniae serotype 5b (strain L20)
Q8BQJ6 0.000433 39 37 2 67 1 Trmt2b tRNA (uracil-5-)-methyltransferase homolog B Mus musculus
B6EKM3 0.000456 39 35 0 65 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Aliivibrio salmonicida (strain LFI1238)
E4ZBM0 0.000466 39 30 3 76 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Neisseria lactamica (strain 020-06)
B5FEQ2 0.000471 39 32 1 61 3 rlmI Ribosomal RNA large subunit methyltransferase I Aliivibrio fischeri (strain MJ11)
Q5E4P6 0.000471 39 32 1 61 3 rlmI Ribosomal RNA large subunit methyltransferase I Aliivibrio fischeri (strain ATCC 700601 / ES114)
Q6LMS7 0.000485 39 34 2 67 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Photobacterium profundum (strain SS9)
B1JQP6 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pseudotuberculosis serotype O:3 (strain YPIII)
Q66CE0 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pseudotuberculosis serotype I (strain IP32953)
A4TKV4 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pestis (strain Pestoides F)
Q1CGL8 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pestis bv. Antiqua (strain Nepal516)
A9R2N9 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pestis bv. Antiqua (strain Angola)
Q7CHM1 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pestis
B2JYU4 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pseudotuberculosis serotype IB (strain PB1/+)
Q1CA17 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pestis bv. Antiqua (strain Antiqua)
A7FJR8 0.00053 39 30 1 62 3 rlmI Ribosomal RNA large subunit methyltransferase I Yersinia pseudotuberculosis serotype O:1b (strain IP 31758)
Q5ZVI4 0.000815 38 32 0 71 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
A5IBU7 0.000831 38 32 0 71 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Legionella pneumophila (strain Corby)
Q5X5A8 0.000839 38 32 0 71 3 rlmD 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD Legionella pneumophila (strain Paris)
B4RYR7 0.00087 38 33 2 80 3 trmA tRNA/tmRNA (uracil-C(5))-methyltransferase Alteromonas mediterranea (strain DSM 17117 / CIP 110805 / LMG 28347 / Deep ecotype)
A9L1I5 0.001 38 32 1 61 3 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC Shewanella baltica (strain OS195)
B8E5Q5 0.001 38 32 1 61 3 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC Shewanella baltica (strain OS223)
A6VKU5 0.001 38 37 1 61 3 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC Actinobacillus succinogenes (strain ATCC 55618 / DSM 22257 / CCUG 43843 / 130Z)
A3D0Y0 0.001 38 32 1 61 3 rlmC 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC Shewanella baltica (strain OS155 / ATCC BAA-1091)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_19745
Feature type CDS
Gene -
Product hypothetical protein
Location 34 - 249 (strand: 1)
Length 216 (nucleotides) / 71 (amino acids)

Contig

Accession ZDB_753
Length 354 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_289
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF09445 RNA cap guanine-N2 methyltransferase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2265 Translation, ribosomal structure and biogenesis (J) J tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family

Protein Sequence

MAPHAKHVYGVEVVPSAIEAAQQNATINQCNNTTFVCGKAEEVILQWKAQGIKPDVVMVDPPRKGCDEKLK

Flanking regions ( +/- flanking 50bp)

ACCTATTGTGGTATTGGAACAATAGGGCTATATATGGCACCACATGCAAAACATGTATACGGTGTTGAAGTAGTACCTTCTGCAATTGAAGCCGCACAACAAAATGCGACTATAAACCAATGCAATAATACAACTTTTGTCTGTGGGAAAGCTGAAGAAGTTATTTTACAATGGAAAGCACAAGGGATTAAACCAGATGTTGTAATGGTTGATCCGCCAAGAAAGGGCTGTGACGAAAAGTTGAAGTAGAGTCGGCAGAGACTGGAGTGTATAAGTAACAGATAAAAGGCAGGGATAAT