Homologs in group_2106

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15845 FBDBKF_15845 100.0 Morganella morganii S1 - Nucleoside-specific channel-forming protein, Tsx
EHELCC_18445 EHELCC_18445 100.0 Morganella morganii S2 - Nucleoside-specific channel-forming protein, Tsx
NLDBIP_17280 NLDBIP_17280 100.0 Morganella morganii S4 - Nucleoside-specific channel-forming protein, Tsx
LHKJJB_17380 LHKJJB_17380 100.0 Morganella morganii S3 - Nucleoside-specific channel-forming protein, Tsx
F4V73_RS16465 F4V73_RS16465 92.5 Morganella psychrotolerans - outer membrane protein OmpK
PMI_RS00525 PMI_RS00525 70.5 Proteus mirabilis HI4320 - outer membrane protein OmpK

Distribution of the homologs in the orthogroup group_2106

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2106

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45564 1.02e-98 291 62 3 237 3 yfeN Uncharacterized protein YfeN Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_17015
Feature type CDS
Gene -
Product Nucleoside-specific channel-forming protein, Tsx
Location 6580 - 7338 (strand: -1)
Length 759 (nucleotides) / 252 (amino acids)

Contig

Accession ZDB_699
Length 56187 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2106
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03502 Nucleoside-specific channel-forming protein, Tsx

Protein Sequence

MKKTTIAALIAATAAFSAQAEYQWGFANVSMNYLDWTPHTTHKSGNSTHKDDFAYLELEGGAGFSWGELYGFFDLENAFNSKNDSDAGDNQRYTFKTTARIYLGDTGFNAYGHVYGTYSLPGNGGNFHEVNTLYGIGYNTEFNGLWFKPFAALHYVDQTFYSGNNGYVLGWVAGYDFNLWNEKFSVTNWNEIELNRNDRYGNGGRDGVNGALALWWTPVPSVTTGIQYRYADNKLGEDFYQQAVVYSIKYNF

Flanking regions ( +/- flanking 50bp)

TACTTCTGACTTCTGTACTCTTTAACGACCAAATAAACAGCTAATAAATTATGAAAAAAACGACTATTGCAGCCCTGATCGCTGCAACCGCCGCGTTTTCTGCGCAGGCTGAATATCAGTGGGGATTTGCTAACGTCAGCATGAACTATCTGGACTGGACTCCGCATACCACTCACAAGAGCGGCAACAGCACGCATAAGGATGACTTTGCGTATCTGGAGCTTGAGGGCGGTGCCGGTTTCAGTTGGGGTGAGCTCTATGGTTTCTTCGACCTCGAGAACGCGTTTAACAGTAAAAACGATTCCGATGCCGGTGATAACCAGCGTTACACCTTCAAAACCACGGCGCGTATCTACCTCGGTGATACCGGTTTCAACGCCTACGGTCATGTTTACGGTACCTACTCTCTGCCGGGTAACGGCGGTAACTTCCATGAAGTGAACACCCTGTACGGTATCGGTTATAACACTGAATTCAACGGCTTATGGTTCAAACCATTTGCTGCCCTGCACTATGTTGATCAAACGTTTTACAGCGGCAACAACGGTTATGTTCTCGGCTGGGTTGCCGGTTATGACTTTAACCTGTGGAATGAAAAATTCAGCGTCACCAACTGGAACGAAATCGAGCTTAACCGCAACGACCGTTACGGCAACGGCGGGCGTGACGGCGTCAACGGCGCGCTGGCCTTATGGTGGACACCGGTTCCGTCAGTGACAACCGGCATTCAGTACCGCTATGCGGATAACAAACTGGGTGAGGATTTTTACCAGCAGGCTGTGGTTTACAGCATAAAATATAACTTCTAGATCACATTTTTTCGCTGCGGGGGGCAAAAACCCCCGTATTTTTACCAGGA