Homologs in group_2106

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15845 FBDBKF_15845 92.5 Morganella morganii S1 - Nucleoside-specific channel-forming protein, Tsx
EHELCC_18445 EHELCC_18445 92.5 Morganella morganii S2 - Nucleoside-specific channel-forming protein, Tsx
NLDBIP_17280 NLDBIP_17280 92.5 Morganella morganii S4 - Nucleoside-specific channel-forming protein, Tsx
LHKJJB_17380 LHKJJB_17380 92.5 Morganella morganii S3 - Nucleoside-specific channel-forming protein, Tsx
HKOGLL_17015 HKOGLL_17015 92.5 Morganella morganii S5 - Nucleoside-specific channel-forming protein, Tsx
PMI_RS00525 PMI_RS00525 71.7 Proteus mirabilis HI4320 - outer membrane protein OmpK

Distribution of the homologs in the orthogroup group_2106

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2106

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P45564 1.43e-96 286 61 3 237 3 yfeN Uncharacterized protein YfeN Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS16465
Feature type CDS
Gene -
Product outer membrane protein OmpK
Location 111776 - 112534 (strand: 1)
Length 759 (nucleotides) / 252 (amino acids)

Contig

Accession term accessions NZ_VXKB01000006 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 212134 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2106
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03502 Nucleoside-specific channel-forming protein, Tsx

Protein Sequence

MKKTTIAAIIAATAAFSAQAEYQWGFANVSMNYLDWTSHTTHKSGNSSHKDDFAYLELEGGAGYSWGELYGFFDLENPFNSKTDSDAGDNQRYTFKTTGRFYLGDSGFNAYGHVYGTYSLPGNGGNFHEVNTLYGIGYNTDFHGLWLKPFAALHYVDQTFYSGNNGYVLGWVAGYDFNLWNEKFSVTNWHEMEFNRNERYGNGGRNGINGALALWWTPVPSVTTGIQYRYADNKLGEDFYQQAIVYSIKYNF

Flanking regions ( +/- flanking 50bp)

TATTTCTGACTTCTTAACTCTTTAACTACAAAATAAATAGCTGACAAATTATGAAAAAAACGACTATTGCGGCCATCATCGCTGCAACCGCCGCGTTTTCTGCGCAGGCTGAGTATCAATGGGGATTTGCAAACGTCAGTATGAACTACCTGGACTGGACTTCGCACACGACGCATAAGAGCGGAAACAGTTCGCATAAAGACGACTTTGCTTACCTGGAACTTGAAGGCGGTGCCGGTTACTCCTGGGGCGAACTTTACGGCTTCTTCGATCTGGAAAACCCGTTTAACAGTAAAACAGATTCTGATGCCGGTGATAATCAACGCTACACGTTCAAAACCACGGGTCGCTTCTATCTGGGTGACAGCGGTTTTAACGCCTACGGACATGTTTACGGCACCTATTCCCTGCCGGGTAACGGCGGCAATTTCCATGAAGTAAATACACTCTACGGGATCGGGTACAACACCGATTTCCACGGTTTATGGCTCAAGCCATTCGCGGCACTCCACTATGTTGATCAAACGTTTTACAGTGGTAACAACGGCTATGTACTTGGCTGGGTTGCCGGATATGACTTCAATCTGTGGAATGAAAAATTCAGTGTCACCAACTGGCATGAAATGGAATTTAACCGCAACGAACGTTACGGCAATGGCGGACGAAATGGTATCAATGGGGCGCTCGCCTTGTGGTGGACACCGGTTCCGTCTGTCACGACCGGTATCCAGTACCGCTATGCTGATAATAAATTAGGTGAAGATTTCTATCAGCAGGCAATAGTTTATAGTATTAAATATAACTTCTAGATCATATTTTCAGACCACGGGGGAAAAAAGCCCCCGTATTCTTACTAAAA