Homologs in group_1499

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_09675 FBDBKF_09675 100.0 Morganella morganii S1 ushA bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
EHELCC_04475 EHELCC_04475 100.0 Morganella morganii S2 ushA bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
NLDBIP_04475 NLDBIP_04475 100.0 Morganella morganii S4 ushA bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
LHKJJB_14155 LHKJJB_14155 100.0 Morganella morganii S3 ushA bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
F4V73_RS00665 F4V73_RS00665 93.2 Morganella psychrotolerans - bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
PMI_RS00220 PMI_RS00220 78.1 Proteus mirabilis HI4320 - bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase

Distribution of the homologs in the orthogroup group_1499

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1499

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P26265 0.0 984 71 0 640 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P08331 0.0 976 70 0 640 1 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Escherichia coli (strain K12)
P53052 0.0 968 70 0 633 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Yersinia enterocolitica
P44764 0.0 792 57 1 643 3 cpdB 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O34313 4.14e-175 540 45 10 599 1 yfkN Trifunctional nucleotide phosphoesterase protein YfkN Bacillus subtilis (strain 168)
O34313 2.57e-13 77 23 26 568 1 yfkN Trifunctional nucleotide phosphoesterase protein YfkN Bacillus subtilis (strain 168)
P22848 2.81e-20 98 25 18 493 3 nutA 5'-nucleotidase Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633)
Q8DFG4 2.98e-20 98 25 20 497 3 nutA 5'-nucleotidase Vibrio vulnificus (strain CMCP6)
A9BJC1 4.51e-20 97 23 17 510 1 mggB Mannosylglucosyl-3-phosphoglycerate phosphatase Petrotoga mobilis (strain DSM 10674 / SJ95)
P07024 1.8e-19 95 23 21 579 1 ushA Protein UshA Escherichia coli (strain K12)
Q9KQ30 2.43e-17 89 24 16 464 3 nutA 5'-nucleotidase Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
P06196 2.6e-17 89 23 18 548 3 ushA Silent protein UshA(0) Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q56878 2.8e-16 85 24 22 557 3 ushA Protein UshA Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q9RN37 4.35e-14 79 23 19 552 3 ushA Protein UshA Salmonella pullorum
B3A0N5 7.7e-12 72 22 22 549 1 APY Apyrase Tabanus yao
P54602 7.12e-11 69 25 8 300 1 yhcR Endonuclease YhcR Bacillus subtilis (strain 168)
B6EWW8 1.13e-10 68 26 7 221 2 None Snake venom 5'-nucleotidase Gloydius brevicauda
F8S0Z7 4.75e-10 66 26 8 223 1 None Snake venom 5'-nucleotidase Crotalus adamanteus
Q8YAJ5 6.17e-09 62 29 7 191 1 lmo0130 Cell wall protein Lmo0130 Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e)
A0A2I4HXH5 1.78e-08 61 25 7 217 1 None Snake venom 5'-nucleotidase (Fragment) Naja atra
O83142 2.45e-08 60 22 19 439 3 TP_0104 Probable 5'-nucleotidase Treponema pallidum (strain Nichols)
P52307 3.5e-08 60 25 11 250 1 None Protein 5NUC (Fragment) Rhipicephalus microplus
P29240 1.16e-06 55 26 11 228 2 None 5'-nucleotidase Diplobatis ommata
Q9XZ43 5.77e-06 53 23 10 255 1 5NUC Protein 5NUC Lutzomyia longipalpis
P21589 1.51e-05 52 27 9 222 1 NT5E 5'-nucleotidase Homo sapiens
P21588 2.28e-05 51 25 9 227 1 Nt5e 5'-nucleotidase Rattus norvegicus
Q05927 2.4e-05 51 26 9 216 1 NT5E 5'-nucleotidase Bos taurus
Q61503 4.25e-05 50 24 10 253 1 Nt5e 5'-nucleotidase Mus musculus
P44569 0.000197 48 23 25 585 1 HI_0206 NAD 5'-nucleotidase Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_12380
Feature type CDS
Gene ushA
Product bifunctional 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase
Location 33208 - 35157 (strand: -1)
Length 1950 (nucleotides) / 649 (amino acids)

Contig

Accession ZDB_690
Length 144397 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1499
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF00149 Calcineurin-like phosphoesterase
PF02872 5'-nucleotidase, C-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0737 Nucleotide transport and metabolism (F)
Defense mechanisms (V)		 FV 2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'- or 3'-nucleotidase, 5'-nucleotidase family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K01119 2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase [EC:3.1.4.16 3.1.3.6] Purine metabolism
Pyrimidine metabolism
Metabolic pathways		 -

Protein Sequence

MRTGLKYSVLALLVSGTVNAATVDLRVMETSDIHSNLIDFDYFKDKPTEQFGLVRTAGLIKAAKGEATNAVLVDNGDLIQGSPLADYMVSKGLNDGEAHPAHKLMNTMGYTVGNFGNHEFNFGLDYLKKAIAGADFPYVNANIIDEKTGKNLFTPYIIVDTPVKDRDGKEHVIKIGYIGFVPPQILIWDKANLEGKVRVNDITETAKKFVPQMKAEGADLIVAIPHSGFSQEPYKAMAENSVYYLSEVPGINAIMFGHSHGVFPGKDFADIKGVNIEQGTVNGIPAVMPGQWGDHLGVVDLVLNNDDGAWKVADAKAQARPIYDKVNKKPLVARDDKLASVIDEQHNATRTFVGKLIGKSPDNMYSYLALLQSDPTVQIVNNAQTDYTRRFIQGDPDLADLPVLSAAAPFKVGGRKNAPADFVEVEKGDMTFRNAADLYLYPNTLVVVKATGAEVTEWLECSAGMFNQINPQSEAPQSLVNWDGFRTYNFDTISGINYQIDLTQPAKYDVECQAVNPQANRIKNVTYQGKPIDPKAVFLVATNNYRAYGGKFAGTGDKHIAFASPDENRSVLAGYIAAETKAKGAVSAQAEQNWTFVPVKTDKKLDIRFETSPGDKATQFIKENAHYPMTRVGTDDVGFAVYQVDLTAK

Flanking regions ( +/- flanking 50bp)

TTGGTACAGAAATCAGGGCATCACGGAAATTAACCGGAAGAGAGGGCAGGGTGAGAACAGGATTAAAATATTCGGTGCTGGCATTACTGGTCAGCGGAACGGTCAATGCCGCGACAGTGGATCTGCGGGTGATGGAAACCTCGGATATTCACAGTAACTTAATTGACTTTGATTATTTCAAAGACAAACCGACAGAGCAGTTTGGTCTGGTCCGCACCGCCGGTTTAATTAAAGCGGCAAAAGGTGAAGCCACCAACGCAGTATTAGTGGATAACGGGGACTTAATTCAGGGCAGCCCGCTGGCGGATTATATGGTCAGTAAAGGGTTAAATGACGGTGAAGCCCATCCGGCACATAAGCTGATGAATACCATGGGTTATACCGTCGGAAACTTCGGTAACCATGAATTTAACTTTGGCCTGGATTATCTGAAAAAAGCCATTGCCGGTGCGGATTTTCCGTATGTGAATGCCAATATTATTGATGAGAAAACCGGTAAGAATCTGTTTACCCCATATATTATCGTTGATACCCCGGTTAAAGATCGCGACGGTAAAGAGCATGTAATTAAAATCGGTTATATCGGTTTTGTACCACCGCAGATCCTTATCTGGGATAAAGCCAATCTGGAAGGAAAAGTCCGCGTCAATGATATTACGGAAACCGCGAAAAAATTTGTGCCGCAAATGAAAGCAGAAGGTGCAGATTTAATTGTCGCTATTCCGCACTCCGGTTTTTCTCAGGAGCCGTATAAAGCGATGGCTGAGAACTCGGTTTATTATCTCAGTGAAGTACCGGGTATTAATGCCATTATGTTCGGTCACTCGCACGGTGTATTTCCGGGCAAAGATTTTGCGGATATCAAAGGCGTTAATATTGAGCAGGGAACCGTTAACGGTATTCCGGCAGTGATGCCCGGCCAGTGGGGGGATCACCTCGGCGTGGTGGATCTGGTGCTGAATAATGATGACGGTGCGTGGAAGGTGGCGGATGCCAAAGCACAGGCGCGTCCGATTTATGACAAAGTCAATAAAAAGCCGCTGGTGGCACGGGATGACAAGCTGGCTTCTGTGATTGATGAGCAGCACAATGCGACCCGGACCTTTGTCGGCAAACTGATTGGTAAATCACCGGATAATATGTACAGCTACCTTGCCTTGCTGCAGAGCGACCCGACGGTGCAGATTGTGAATAATGCACAGACTGATTATACCCGCCGCTTTATTCAGGGCGATCCGGATCTGGCAGATTTACCGGTGCTGTCAGCGGCTGCACCGTTTAAAGTGGGCGGACGCAAAAATGCCCCGGCGGATTTCGTCGAGGTGGAAAAAGGGGATATGACGTTCCGCAACGCGGCGGATCTCTATCTCTACCCGAATACGCTGGTGGTGGTGAAAGCGACCGGTGCGGAAGTGACCGAATGGCTGGAGTGCTCCGCCGGGATGTTCAATCAGATTAACCCGCAGTCAGAGGCACCGCAGAGCCTGGTCAACTGGGATGGTTTCAGAACCTATAATTTCGATACCATTTCCGGGATCAACTATCAGATAGACCTGACACAACCGGCAAAATATGATGTGGAGTGCCAGGCAGTCAATCCGCAGGCCAACCGTATCAAAAATGTGACTTATCAGGGTAAACCGATTGATCCGAAAGCGGTTTTCCTGGTTGCCACCAATAACTACCGTGCTTACGGCGGAAAATTTGCCGGTACCGGTGACAAACATATTGCGTTTGCCTCACCGGATGAAAACCGCAGTGTGCTGGCCGGTTATATCGCGGCAGAAACCAAAGCGAAAGGTGCGGTATCAGCGCAGGCTGAGCAAAACTGGACATTTGTGCCGGTGAAAACGGATAAGAAATTAGATATCCGCTTTGAAACTTCACCGGGCGATAAAGCCACACAGTTTATTAAAGAAAATGCCCATTACCCGATGACCCGGGTCGGGACGGATGATGTGGGTTTTGCGGTTTATCAGGTTGATTTAACAGCGAAGTAAGCAGTTACTCACGAAAGCCGCCGTCAGCGGCGGCTTTTATCATCATTTTT