Homologs in group_2689

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05445 FBDBKF_05445 100.0 Morganella morganii S1 yiiX YiiX family permuted papain-like enzyme
EHELCC_12145 EHELCC_12145 100.0 Morganella morganii S2 yiiX YiiX family permuted papain-like enzyme
NLDBIP_12485 NLDBIP_12485 100.0 Morganella morganii S4 yiiX YiiX family permuted papain-like enzyme
LHKJJB_12345 LHKJJB_12345 100.0 Morganella morganii S3 yiiX YiiX family permuted papain-like enzyme
F4V73_RS03850 F4V73_RS03850 77.0 Morganella psychrotolerans - YiiX family permuted papain-like enzyme

Distribution of the homologs in the orthogroup group_2689

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2689

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P32167 3.42e-79 238 62 0 177 3 yiiX Uncharacterized protein YiiX Escherichia coli (strain K12)
P24238 1.98e-15 74 25 2 174 4 yebB Uncharacterized protein YebB Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_10960
Feature type CDS
Gene yiiX
Product YiiX family permuted papain-like enzyme
Location 82897 - 83499 (strand: 1)
Length 603 (nucleotides) / 200 (amino acids)

Contig

Accession ZDB_688
Length 181491 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2689
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3863 Function unknown (S) S Uncharacterized conserved protein YycO, NlpC/P60 family

Protein Sequence

MISVLRHCLLLLCFFASAVYAWQPQQGDIIFHTSRTSQSLAIQKATGSVYSHMGIILLRDGKPYVYEAAKTVRFTPLKQWIARGTGNHYVVKRLKKPLSASQQQALYREAIRYQSRPYDLTFSWDDERIYCSELVWKIYKNALNTEVGQLQTLREFDLSSPEVQAKMKERYGKAVPLNETVISPVAVFDSPLLTTVYESR

Flanking regions ( +/- flanking 50bp)

TGTGTCCGGTGCAGTTTTTTTATGGCTGTTAACCATGCCGGAGGACTTCTGTGATCAGTGTATTGCGTCATTGTCTGCTGTTGCTCTGTTTTTTTGCCTCCGCTGTGTACGCGTGGCAGCCGCAGCAGGGCGATATTATTTTCCATACCTCGCGCACCTCTCAGAGCCTCGCCATACAAAAAGCGACCGGGTCGGTCTACAGCCATATGGGGATTATTCTGCTGCGTGACGGTAAGCCGTATGTGTATGAGGCGGCAAAAACAGTCCGCTTTACACCGCTGAAACAGTGGATTGCACGCGGCACCGGTAACCATTACGTGGTGAAACGCCTGAAAAAGCCGCTGAGTGCCTCACAGCAGCAGGCGTTATACCGTGAGGCGATACGGTATCAGTCCCGGCCTTACGACCTGACATTTTCATGGGATGATGAGCGGATTTATTGTTCTGAACTGGTCTGGAAAATCTATAAAAATGCCCTGAATACAGAGGTCGGTCAGTTACAGACATTGCGGGAGTTTGATTTATCTTCACCGGAAGTACAGGCAAAGATGAAAGAACGGTACGGAAAGGCGGTTCCGCTGAATGAAACGGTGATTTCGCCGGTGGCTGTGTTTGATTCACCGCTGCTGACAACGGTATATGAAAGCCGGTAAGCATTCACCGGCTTTATATGTTCCTGAGCAGCCCGTCAGCCGATTTTTGG