Homologs in group_1046

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_05915 FBDBKF_05915 100.0 Morganella morganii S1 nlpE envelope stress response activation lipoprotein NlpE
EHELCC_08960 EHELCC_08960 100.0 Morganella morganii S2 nlpE envelope stress response activation lipoprotein NlpE
NLDBIP_09340 NLDBIP_09340 100.0 Morganella morganii S4 nlpE envelope stress response activation lipoprotein NlpE
LHKJJB_08415 LHKJJB_08415 100.0 Morganella morganii S3 nlpE envelope stress response activation lipoprotein NlpE
F4V73_RS15980 F4V73_RS15980 85.4 Morganella psychrotolerans nlpE envelope stress response activation lipoprotein NlpE
PMI_RS11185 PMI_RS11185 51.4 Proteus mirabilis HI4320 nlpE envelope stress response activation lipoprotein NlpE

Distribution of the homologs in the orthogroup group_1046

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_1046

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P40710 4.83e-46 155 38 2 201 1 nlpE Lipoprotein NlpE Escherichia coli (strain K12)
P29722 0.000403 42 34 4 87 1 tpp17 17 kDa lipoprotein Treponema pallidum (strain Nichols)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_07965
Feature type CDS
Gene nlpE
Product envelope stress response activation lipoprotein NlpE
Location 209229 - 209888 (strand: 1)
Length 660 (nucleotides) / 219 (amino acids)

Contig

Accession ZDB_684
Length 217237 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1046
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04170 NlpE N-terminal domain
PF17185 NlpE C-terminal OB domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3015 Cell wall/membrane/envelope biogenesis (M)
Defense mechanisms (V)		 MV Uncharacterized lipoprotein NlpE involved in copper resistance

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K06079 copper homeostasis protein (lipoprotein) Cationic antimicrobial peptide (CAMP) resistance -

Protein Sequence

MKNLTKLLLAAGIFSITACSSTVVVPPTPEVHVLDRAYNGVVPCADCSGMDVTVLLEGDGTYVMQRTYLETRDGNQTFFETGTWAKDGEKLRLTDTAGQRAYYDPQDKSLVMLDIDGNPVKSDLNYTLKMVKPVQLKGEYRYMADAATFKDCQTGVVYAVPGNIGLEQGYGKLGVEGGKPVYLEVEGYYTIRPSMEDGQFDQALIQTGKSVLDKSRGCQ

Flanking regions ( +/- flanking 50bp)

ACTGACAATCATTTTGCTAACATTACCTCATCTGATGTTCAGGGGGAAACATGAAAAATCTGACAAAACTCTTATTGGCGGCAGGCATTTTCAGCATTACGGCCTGTAGTTCGACAGTGGTTGTGCCACCAACTCCGGAAGTCCATGTTCTTGACCGTGCCTATAACGGCGTGGTTCCGTGTGCCGATTGCTCCGGCATGGATGTGACCGTTTTACTGGAAGGTGACGGCACCTATGTTATGCAGCGCACCTATCTGGAAACCCGCGACGGCAACCAGACCTTCTTTGAAACCGGGACCTGGGCGAAAGACGGCGAAAAACTGCGTCTGACCGATACTGCCGGGCAGCGTGCTTATTATGATCCGCAGGATAAATCGCTGGTAATGCTGGATATCGACGGCAACCCGGTTAAATCGGATTTGAACTACACCCTGAAAATGGTGAAACCGGTACAGCTGAAAGGTGAATATCGTTATATGGCGGATGCGGCAACGTTTAAAGATTGCCAGACCGGTGTGGTTTACGCGGTACCGGGCAATATCGGCTTAGAGCAGGGCTACGGCAAGCTGGGCGTTGAAGGCGGAAAACCTGTCTATCTGGAAGTGGAAGGGTATTACACCATCCGTCCGTCCATGGAAGACGGCCAGTTTGATCAGGCGCTGATCCAGACCGGCAAATCCGTACTGGATAAATCACGCGGTTGTCAGTAAGTTCTTCCGGCTCCCGCAGGCATAAAAAAGGCTGAACAGATGTTCAGCCT