Homologs in group_285

Help

7 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_06405 FBDBKF_06405 100.0 Morganella morganii S1 yqhD alcohol dehydrogenase
EHELCC_09450 EHELCC_09450 100.0 Morganella morganii S2 yqhD alcohol dehydrogenase
NLDBIP_09830 NLDBIP_09830 100.0 Morganella morganii S4 yqhD alcohol dehydrogenase
LHKJJB_07925 LHKJJB_07925 100.0 Morganella morganii S3 yqhD alcohol dehydrogenase
F4V73_RS07320 F4V73_RS07320 34.6 Morganella psychrotolerans - iron-containing alcohol dehydrogenase
F4V73_RS15520 F4V73_RS15520 92.5 Morganella psychrotolerans yqhD alcohol dehydrogenase
PMI_RS00120 PMI_RS00120 68.8 Proteus mirabilis HI4320 - iron-containing alcohol dehydrogenase

Distribution of the homologs in the orthogroup group_285

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_285

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q46856 0.0 557 69 1 386 1 yqhD Alcohol dehydrogenase YqhD Escherichia coli (strain K12)
O05239 1.62e-97 298 40 6 391 3 yugJ Probable NADH-dependent butanol dehydrogenase 1 Bacillus subtilis (strain 168)
O05240 2.45e-96 295 42 7 393 3 yugK Probable NADH-dependent butanol dehydrogenase 2 Bacillus subtilis (strain 168)
A4ISB9 2.43e-94 290 40 5 390 1 adh2 Long-chain-alcohol dehydrogenase 2 Geobacillus thermodenitrificans (strain NG80-2)
Q24857 6.1e-92 284 42 10 379 1 ADH3 NADP-dependent alcohol dehydrogenase 3 Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)
Q04945 5.43e-85 266 37 6 391 1 bdhB NADH-dependent butanol dehydrogenase B Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q04944 7.06e-85 266 37 5 389 1 bdhA NADH-dependent butanol dehydrogenase A Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
P13604 3.79e-32 128 26 7 364 3 adh1 NADPH-dependent butanol dehydrogenase Clostridium saccharobutylicum
J1H1J3 1.46e-29 120 30 6 303 1 sqwF Sulfoacetaldehyde reductase Clostridium sp. (strain MSTE9)
A4IP64 8.29e-27 113 27 11 366 1 adh1 Long-chain-alcohol dehydrogenase 1 Geobacillus thermodenitrificans (strain NG80-2)
P41795 7.92e-25 107 30 6 276 2 eutG Probable alcohol dehydrogenase EutG Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q09669 8.35e-24 105 24 11 386 1 adh4 Alcohol dehydrogenase 4 Schizosaccharomyces pombe (strain 972 / ATCC 24843)
Q59104 2.13e-22 100 28 9 365 1 gbd 4-hydroxybutyrate dehydrogenase Cupriavidus necator
Q24803 5.08e-21 98 26 9 315 1 ADH2 Aldehyde-alcohol dehydrogenase 2 Entamoeba histolytica (strain ATCC 30459 / HM-1:IMSS / ABRM)
A6ZTT5 9.83e-21 95 26 10 353 3 ADH4 Alcohol dehydrogenase 4 Saccharomyces cerevisiae (strain YJM789)
P71017 1.83e-20 95 25 13 396 1 gbsB Choline dehydrogenase Bacillus subtilis (strain 168)
P76553 3.36e-20 94 27 5 276 3 eutG Probable alcohol dehydrogenase EutG Escherichia coli (strain K12)
P10127 3.36e-20 94 25 11 354 1 ADH4 Alcohol dehydrogenase 4 Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
P45513 3.28e-18 89 25 7 346 1 dhaT 1,3-propanediol dehydrogenase Citrobacter freundii
Q9F282 1.07e-17 87 25 10 363 1 adhA Long-chain primary alcohol dehydrogenase AdhA Thermoanaerobacter ethanolicus
P31005 2.79e-17 85 23 7 319 1 mdh NAD-dependent methanol dehydrogenase Bacillus methanolicus
Q9XDN0 5.33e-17 85 26 8 293 1 pduQ 1-propanol dehydrogenase PduQ Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
A0A0S1X9S7 2.78e-16 83 26 15 368 1 TBCH5v1_0547 Alcohol dehydrogenase Thermococcus barophilus
Q59477 3.56e-16 82 25 5 310 1 dhaT 1,3-propanediol dehydrogenase Klebsiella pneumoniae
P0A9S1 1.15e-15 81 24 9 352 1 fucO Lactaldehyde reductase Escherichia coli (strain K12)
P0A9S2 1.15e-15 81 24 9 352 3 fucO Lactaldehyde reductase Escherichia coli O157:H7
B1VB76 3.39e-15 79 25 9 304 3 pduQ 1-propanol dehydrogenase PduQ Citrobacter freundii
P37686 5.76e-15 79 24 7 327 3 yiaY Probable alcohol dehydrogenase Escherichia coli (strain K12)
F8DVL8 6.15e-15 79 21 7 358 3 adhB Alcohol dehydrogenase 2 Zymomonas mobilis subsp. mobilis (strain ATCC 10988 / DSM 424 / LMG 404 / NCIMB 8938 / NRRL B-806 / ZM1)
P0DJA2 6.38e-15 79 21 7 358 1 adhB Alcohol dehydrogenase 2 Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
A0A0H2ZM56 1.04e-14 79 23 10 370 1 adhE Aldehyde-alcohol dehydrogenase Streptococcus pneumoniae serotype 2 (strain D39 / NCTC 7466)
A0A0H2URT2 1.09e-14 79 23 10 370 3 adhE Aldehyde-alcohol dehydrogenase Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4)
E5Y946 4.98e-14 76 24 11 361 1 sarD Sulfoacetaldehyde reductase Bilophila wadsworthia (strain 3_1_6)
Q7Q547 3.46e-12 71 22 12 402 3 AGAP006646 Probable hydroxyacid-oxoacid transhydrogenase, mitochondrial Anopheles gambiae
P27137 4.91e-12 70 23 7 309 3 tfdFI Maleylacetate reductase 1 Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
A8WTJ7 6.81e-12 70 23 7 290 3 hphd-1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Caenorhabditis briggsae
P0A9Q7 8.47e-12 70 22 10 388 1 adhE Bifunctional aldehyde-alcohol dehydrogenase AdhE Escherichia coli (strain K12)
P0A9Q8 8.47e-12 70 22 10 388 1 adhE Bifunctional aldehyde-alcohol dehydrogenase AdhE Escherichia coli O157:H7
Q9U2M4 1.34e-11 69 23 8 298 3 hphd-1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Caenorhabditis elegans
Q17EN4 2.63e-11 68 24 12 345 3 AAEL003729 Probable hydroxyacid-oxoacid transhydrogenase, mitochondrial Aedes aegypti
Q28XT3 1.74e-10 65 24 13 398 3 GA17444 Probable hydroxyacid-oxoacid transhydrogenase, mitochondrial Drosophila pseudoobscura pseudoobscura
Q5W9E3 2.02e-09 62 24 5 281 1 linF Maleylacetate reductase Sphingobium indicum (strain DSM 16413 / CCM 7287 / MTCC 6362 / UT26 / NBRC 101211 / UT26S)
A6QP15 2.76e-09 62 23 12 389 2 ADHFE1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Bos taurus
Q9W265 2.9e-09 62 21 13 406 2 T3dh Probable hydroxyacid-oxoacid transhydrogenase, mitochondrial Drosophila melanogaster
Q08B39 8.08e-09 60 25 5 230 2 adhfe1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Xenopus laevis
Q9RCG0 1.37e-08 60 23 7 327 1 mno Methanol:N,N-dimethyl-4-nitrosoaniline oxidoreductase Amycolatopsis methanolica
Q6P371 5.52e-08 58 25 4 220 2 adhfe1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Xenopus tropicalis
Q8IWW8 2.79e-07 55 22 10 334 1 ADHFE1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Homo sapiens
O30847 3.02e-07 55 24 8 298 3 clcE Maleylacetate reductase Pseudomonas knackmussii (strain DSM 6978 / CCUG 54928 / LMG 23759 / B13)
Q45072 5.04e-07 54 26 5 201 3 tftE Maleylacetate reductase Burkholderia cepacia
Q5RF11 7.01e-07 54 21 12 389 2 ADHFE1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Pongo abelii
O87612 7.21e-07 54 24 8 298 3 clcE Maleylacetate reductase Pseudomonas aeruginosa
P94135 8.29e-07 54 23 7 291 1 tfdFII Maleylacetate reductase 2 Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197)
Q93T12 1.03e-06 53 23 9 286 1 tfdF Maleylacetate reductase Delftia acidovorans
P27101 1.03e-06 53 23 9 286 3 tcbF Maleylacetate reductase Pseudomonas sp. (strain P51)
O84992 1.64e-06 53 24 8 286 3 macA Maleylacetate reductase 1 Rhodococcus opacus
P38945 1.68e-06 53 24 5 226 1 4hbD 4-hydroxybutyrate dehydrogenase Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680)
Q4QQW3 2.18e-06 53 22 13 392 1 Adhfe1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Rattus norvegicus
Q8R0N6 5.53e-06 52 22 13 392 1 Adhfe1 Hydroxyacid-oxoacid transhydrogenase, mitochondrial Mus musculus
A0A3G9HPE6 3.89e-05 48 25 13 278 3 ALT3 Dehydrogenase ALT3 Alternaria alternata
A1IIX4 0.000252 46 25 3 154 1 graC Maleylacetate reductase Rhizobium sp. (strain MTP-10005)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_07475
Feature type CDS
Gene yqhD
Product alcohol dehydrogenase
Location 99646 - 100803 (strand: -1)
Length 1158 (nucleotides) / 385 (amino acids)

Contig

Accession ZDB_684
Length 217237 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_285
Orthogroup size 8
N. genomes 7

Actions

Genomic region

Domains

PF00465 Iron-containing alcohol dehydrogenase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1979 Energy production and conversion (C) C Alcohol dehydrogenase YqhD, Fe-dependent ADH family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K08325 NADP-dependent alcohol dehydrogenase [EC:1.1.-.-] Propanoate metabolism
Metabolic pathways		 -

Protein Sequence

MNNFTLFTPTKIRFGKGQIAKLSSEIPKDAKVLMLYGGGSIKRNGVYEQVLAALDGYDVHEFSGIEPNPAYETLVKAIAYIREHDISYLLAVGGGSVIDGTKFIAAAVDYPGDPWDIITTGGRNIRSALPIACVLTLPATGSETNCFSVVSRRETGDKQSFGHPLVHPKCAILDPQTTYTLPPRQTANGVVDAFIHTLEQYLTYPVNAKIQDRFAEGILLTLIEEGPKVLANPEDYDSRANVMWAATQALSGLIGAGVPQDWATHALGHEITALYGLDHAQTLAIVLPALLREKRKTKREKLLQYAERVWHLTDGSEESRIECAIEATRVFFEELGIKTRFSDYQIDDSGIPKLVAKLTEHGQTALGEHQDITPEVSERIYRAAV

Flanking regions ( +/- flanking 50bp)

ACACTTAATGGTTATCCGCTTCATTTTTCCTAATCTTACCCGGAGAAATAATGAACAACTTCACTCTTTTCACCCCGACAAAAATTCGTTTCGGCAAAGGCCAAATCGCCAAACTCAGCAGTGAAATCCCGAAAGATGCCAAAGTACTGATGCTGTACGGCGGCGGCAGTATTAAGCGTAACGGTGTTTACGAGCAGGTACTGGCTGCTCTGGACGGTTATGATGTTCATGAATTTTCAGGTATCGAGCCGAACCCGGCCTATGAAACGCTGGTAAAAGCGATTGCGTATATCCGTGAGCATGACATCAGCTATCTGCTGGCGGTCGGCGGCGGGTCTGTTATCGACGGTACCAAGTTTATTGCCGCTGCGGTGGATTATCCGGGCGACCCGTGGGATATCATCACCACCGGAGGCCGCAATATCCGCAGTGCACTGCCGATTGCCTGTGTGCTGACACTTCCGGCCACCGGTTCTGAAACCAACTGTTTTTCTGTGGTCAGCCGCCGTGAAACCGGAGATAAGCAATCATTCGGTCACCCGCTGGTGCATCCGAAGTGTGCCATTCTTGATCCGCAGACCACTTACACCCTGCCGCCGCGCCAGACAGCCAACGGTGTGGTTGATGCCTTTATTCACACCCTCGAGCAGTATCTGACGTATCCGGTGAATGCCAAAATTCAGGACCGGTTTGCAGAAGGTATTCTGCTGACACTGATTGAGGAAGGCCCGAAAGTACTGGCAAATCCGGAGGATTATGACAGCCGTGCCAATGTGATGTGGGCCGCCACCCAGGCGCTGAGCGGGCTGATTGGTGCCGGTGTGCCGCAGGACTGGGCAACCCACGCACTGGGCCATGAAATTACTGCGCTGTACGGACTGGATCACGCGCAGACACTGGCGATTGTGCTACCGGCACTGCTGCGGGAAAAACGCAAAACCAAGCGCGAAAAATTATTACAGTACGCTGAGCGTGTCTGGCATCTGACAGACGGTTCAGAAGAGAGCCGGATTGAGTGCGCCATTGAAGCAACCCGCGTTTTCTTTGAAGAGCTGGGCATAAAAACCCGTTTCTCTGATTATCAGATTGATGACAGCGGCATTCCCAAACTGGTTGCCAAGCTCACTGAACACGGCCAGACCGCCCTGGGTGAACACCAGGACATCACACCGGAAGTCAGTGAACGGATCTACCGGGCTGCCGTCTGATACAACATAAACACTGATTGGAGGCCACATGAACAAACCTGCATTAGTTA