Homologs in group_2308

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_17725 FBDBKF_17725 100.0 Morganella morganii S1 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
EHELCC_09750 EHELCC_09750 100.0 Morganella morganii S2 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
NLDBIP_10130 NLDBIP_10130 100.0 Morganella morganii S4 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
LHKJJB_07625 LHKJJB_07625 100.0 Morganella morganii S3 fecR Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
F4V73_RS15235 F4V73_RS15235 74.7 Morganella psychrotolerans - FecR domain-containing protein
PMI_RS18445 PMI_RS18445 43.6 Proteus mirabilis HI4320 - FecR domain-containing protein

Distribution of the homologs in the orthogroup group_2308

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2308

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P23485 8.05e-12 68 25 10 316 1 fecR Ferric citrate uptake sigma factor regulator FecR Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_07175
Feature type CDS
Gene fecR
Product Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport
Location 35117 - 36079 (strand: -1)
Length 963 (nucleotides) / 320 (amino acids)

Contig

Accession ZDB_684
Length 217237 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2308
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF04773 FecR protein
PF16220 Domain of unknown function (DUF4880)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3712 Inorganic ion transport and metabolism (P)
Signal transduction mechanisms (T)		 PT Periplasmic ferric-dicitrate binding protein FecR, regulates iron transport

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07165 transmembrane sensor Two-component system -

Protein Sequence

MTDRREQDEREDAAALWFTRWHSQSMTAQQQRELQAWLAASPENRQAFDDMALLWQEMSALPRPEITEQAPARAFPLLRPLRHTLAGLFILVMLFLPYSQLPALLMDNLTLATAAESKSMILPDGSRIFLSRDSEADIAYEQTHRRISLVRGTAFFQVKSNPWRPFVIRADGREITVVGTEFDVSRRGTEVAVSVANGIVALRDAPDEKPVYLRAGDKAVSPAQGSALLLSHIPPEQAGEWRNGQITLTDTPLRDVVARLAPYSNHPVSLAANVMDLTVSGRVTLSETDAFFTALPLLLPVEVTELHDGSLLIVKKNKNK

Flanking regions ( +/- flanking 50bp)

CTGCTGCAATGTAAACGCGCCATGAATGCCGCAGAACAGAAGGACGGGGAATGACAGACCGGCGGGAGCAGGACGAACGGGAAGACGCCGCCGCACTGTGGTTTACGCGCTGGCACAGCCAGAGCATGACGGCACAGCAGCAGCGGGAATTACAGGCATGGCTGGCGGCTTCCCCGGAAAACCGGCAGGCGTTTGATGATATGGCGCTGCTGTGGCAGGAGATGTCGGCCCTGCCGCGCCCGGAAATCACAGAGCAGGCACCCGCCCGTGCTTTTCCGCTTCTGCGCCCGCTGCGCCATACCCTCGCCGGGCTGTTTATCCTGGTGATGCTGTTTCTGCCCTACAGCCAGTTACCTGCCCTGCTGATGGATAACCTGACGCTCGCCACCGCCGCAGAAAGCAAATCCATGATCCTGCCGGACGGCAGCCGTATTTTTCTCAGCCGTGACAGCGAAGCGGATATTGCCTATGAACAGACACACCGCCGCATTTCCCTGGTGCGCGGTACCGCCTTTTTTCAGGTGAAATCCAACCCGTGGCGGCCGTTTGTCATCCGTGCGGACGGCAGAGAGATAACCGTTGTCGGCACGGAATTTGATGTCAGCCGCCGGGGAACGGAAGTGGCGGTCTCTGTGGCAAACGGGATTGTCGCCCTGCGGGATGCGCCGGATGAAAAACCGGTGTATCTGCGCGCCGGGGATAAAGCCGTCAGCCCCGCGCAGGGATCGGCACTGCTGCTCAGCCATATCCCGCCGGAACAGGCCGGGGAGTGGCGCAACGGACAAATCACCCTCACCGATACCCCGCTGCGTGATGTTGTTGCCCGCCTCGCACCTTACAGCAACCACCCCGTCTCCCTTGCCGCCAATGTGATGGATCTGACCGTCTCCGGCCGGGTCACCCTTTCCGAAACAGATGCCTTTTTTACGGCATTGCCGCTGCTGTTACCGGTTGAAGTCACCGAACTGCATGACGGCAGCCTGTTGATTGTGAAGAAAAATAAAAATAAATGAAAAAAAGAATAATTAACAGGTGAGGATAATTCTCATTTCCGCGTCTTCTG