Homologs in group_2539

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02455 FBDBKF_02455 100.0 Morganella morganii S1 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
EHELCC_02925 EHELCC_02925 100.0 Morganella morganii S2 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
NLDBIP_00535 NLDBIP_00535 100.0 Morganella morganii S4 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
LHKJJB_01500 LHKJJB_01500 100.0 Morganella morganii S3 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
F4V73_RS04830 F4V73_RS04830 89.4 Morganella psychrotolerans - Crp/Fnr family transcriptional regulator

Distribution of the homologs in the orthogroup group_2539

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2539

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A2T6 2.55e-09 58 26 6 192 1 crp cAMP-activated global transcriptional regulator CRP Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2T7 2.55e-09 58 26 6 192 1 crp cAMP-activated global transcriptional regulator CRP Klebsiella aerogenes
P0ACK1 3.07e-09 58 26 6 192 3 crp cAMP-activated global transcriptional regulator CRP Shigella flexneri
P0ACJ8 3.07e-09 58 26 6 192 1 crp DNA-binding transcriptional dual regulator CRP Escherichia coli (strain K12)
P0ACJ9 3.07e-09 58 26 6 192 3 crp cAMP-activated global transcriptional regulator CRP Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACK0 3.07e-09 58 26 6 192 3 crp cAMP-activated global transcriptional regulator CRP Escherichia coli O157:H7
O05689 1.9e-07 53 25 6 192 3 crp cAMP-activated global transcriptional regulator CRP Pasteurella multocida (strain Pm70)
P29281 9.25e-07 51 23 6 192 1 crp cAMP-activated global transcriptional regulator CRP Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P55222 1.56e-06 50 22 3 170 1 vfr cAMP-activated global transcriptional regulator Vfr Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q0UJ42 1.06e-05 49 26 0 102 3 NTE1 Lysophospholipase NTE1 Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
Q5SID7 1.67e-05 47 24 4 193 1 TTHA1437 Cyclic AMP receptor protein Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
P22260 3.41e-05 47 25 4 171 1 clp CRP-like protein Clp Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
B0RN01 3.41e-05 47 25 4 171 3 clp CRP-like protein Clp Xanthomonas campestris pv. campestris (strain B100)
Q4UZF6 3.41e-05 47 25 4 171 1 clp CRP-like protein Clp Xanthomonas campestris pv. campestris (strain 8004)
Q2H0D3 3.63e-05 47 26 5 121 3 NTE1 Lysophospholipase NTE1 Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
Q7S8J1 3.9e-05 47 26 5 115 3 nte1 Lysophospholipase nte1 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
Q5GV61 0.000103 45 24 4 171 3 clp CRP-like protein Clp Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)
B2SL05 0.000103 45 24 4 171 3 clp CRP-like protein Clp Xanthomonas oryzae pv. oryzae (strain PXO99A)
Q2NYD9 0.000103 45 24 4 171 3 clp CRP-like protein Clp Xanthomonas oryzae pv. oryzae (strain MAFF 311018)
Q3BYB3 0.000138 45 24 5 171 3 clp CRP-like protein Clp Xanthomonas euvesicatoria pv. vesicatoria (strain 85-10)
Q8PQ45 0.000138 45 24 5 171 1 clp CRP-like protein Clp Xanthomonas axonopodis pv. citri (strain 306)
Q6CWC2 0.000211 45 25 3 104 3 NTE1 Lysophospholipase NTE1 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
A2R350 0.000357 44 26 2 103 3 nte1 Lysophospholipase nte1 Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
Q5BAE9 0.000381 44 26 2 103 3 nte1 Lysophospholipase nte1 Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
A5E708 0.000481 44 27 3 122 3 NTE1 Lysophospholipase NTE1 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
P12368 0.000515 43 27 2 84 1 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit Rattus norvegicus
Q5A368 0.000648 43 27 1 112 3 NTE1 Lysophospholipase NTE1 Candida albicans (strain SC5314 / ATCC MYA-2876)
Q6CPK7 0.000823 43 32 2 98 3 PKAR cAMP-dependent protein kinase regulatory subunit Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)

  • Number of RefSeq hits:

General

Source Morganella morganii S5
Locus tag HKOGLL_01540
Feature type CDS
Gene crp
Product cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
Location 291404 - 292060 (strand: 1)
Length 657 (nucleotides) / 218 (amino acids)

Contig

Accession ZDB_679
Length 398279 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2539
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00027 Cyclic nucleotide-binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0664 Signal transduction mechanisms (T) T cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases

Protein Sequence

MQNTTPFRELWLKFSEEELLPEADGLLRDAPEVVRNSVTTLHIYNGQNLICQGDPAQAVYIILDGEFIVNKQAENGKQVGLTFCYRGEFLGEMEAICRQAYRYDVIALSDCRVLRMPAATFLSWLSQDHRLSLLLNRQLAKRCLINGEQRLMNAVDSIENNLLYMLTQISGHQIHLPRDMLASILGTSRRHTDKVLLRLKTQGKIILSEGVIGLVKPD

Flanking regions ( +/- flanking 50bp)

ACCATGCTAACGTTTACCCACTGATTATCCCGTCCTGACAGATACGGTACATGCAAAATACAACCCCGTTTCGTGAATTATGGCTGAAATTCAGCGAAGAAGAGCTGCTGCCGGAGGCAGACGGCCTGCTCCGTGATGCGCCGGAAGTTGTCAGAAACAGTGTCACCACACTGCATATTTATAACGGACAGAATCTGATTTGCCAGGGCGACCCGGCTCAGGCGGTCTATATCATTCTGGACGGCGAGTTTATTGTTAACAAGCAGGCGGAGAATGGGAAGCAGGTCGGGCTGACATTCTGCTATCGTGGTGAATTCCTCGGGGAGATGGAGGCGATTTGCCGGCAGGCATACCGTTATGATGTGATTGCGCTGTCAGACTGCCGTGTACTGCGGATGCCGGCGGCAACATTTCTGTCCTGGTTGTCACAGGATCACCGCCTGTCTCTGCTGCTTAACCGCCAGCTGGCAAAACGCTGCCTTATCAACGGTGAACAGCGGCTGATGAATGCTGTTGATTCCATCGAAAACAATCTGCTCTATATGCTGACACAAATCAGCGGCCATCAGATCCATCTTCCCCGTGACATGCTGGCCAGCATTCTCGGCACATCGCGGCGTCATACTGATAAAGTTCTGCTGCGCCTGAAAACACAGGGAAAAATTATCCTCAGTGAAGGTGTGATCGGGCTGGTAAAACCGGACTGAACTGCGATCCGTGCCATTGTGCGCCGGTAAGTATAAGCATAGTATTACTG