Homologs in group_2539

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02455 FBDBKF_02455 89.4 Morganella morganii S1 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
EHELCC_02925 EHELCC_02925 89.4 Morganella morganii S2 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
NLDBIP_00535 NLDBIP_00535 89.4 Morganella morganii S4 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
LHKJJB_01500 LHKJJB_01500 89.4 Morganella morganii S3 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases
HKOGLL_01540 HKOGLL_01540 89.4 Morganella morganii S5 crp cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases

Distribution of the homologs in the orthogroup group_2539

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2539

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0A2T6 5.19e-08 54 25 3 170 1 crp cAMP-activated global transcriptional regulator CRP Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2T7 5.19e-08 54 25 3 170 1 crp cAMP-activated global transcriptional regulator CRP Klebsiella aerogenes
P0ACK1 6.38e-08 54 25 3 170 3 crp cAMP-activated global transcriptional regulator CRP Shigella flexneri
P0ACJ8 6.38e-08 54 25 3 170 1 crp DNA-binding transcriptional dual regulator CRP Escherichia coli (strain K12)
P0ACJ9 6.38e-08 54 25 3 170 3 crp cAMP-activated global transcriptional regulator CRP Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0ACK0 6.38e-08 54 25 3 170 3 crp cAMP-activated global transcriptional regulator CRP Escherichia coli O157:H7
Q0UJ42 1.34e-06 52 26 0 102 3 NTE1 Lysophospholipase NTE1 Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173)
Q2H0D3 2.75e-06 51 27 5 121 3 NTE1 Lysophospholipase NTE1 Chaetomium globosum (strain ATCC 6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
Q7S8J1 2.91e-06 51 28 5 115 3 nte1 Lysophospholipase nte1 Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
O05689 3.86e-06 49 24 3 181 3 crp cAMP-activated global transcriptional regulator CRP Pasteurella multocida (strain Pm70)
P55222 1.42e-05 47 22 3 170 1 vfr cAMP-activated global transcriptional regulator Vfr Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q5SID7 2.21e-05 47 24 2 175 1 TTHA1437 Cyclic AMP receptor protein Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)
A2R350 2.37e-05 48 28 2 103 3 nte1 Lysophospholipase nte1 Aspergillus niger (strain ATCC MYA-4892 / CBS 513.88 / FGSC A1513)
P22260 2.99e-05 47 25 4 171 1 clp CRP-like protein Clp Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25)
B0RN01 2.99e-05 47 25 4 171 3 clp CRP-like protein Clp Xanthomonas campestris pv. campestris (strain B100)
Q4UZF6 2.99e-05 47 25 4 171 1 clp CRP-like protein Clp Xanthomonas campestris pv. campestris (strain 8004)
P29281 4.72e-05 46 21 3 169 1 crp cAMP-activated global transcriptional regulator CRP Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
A5E708 5.65e-05 47 27 7 182 3 NTE1 Lysophospholipase NTE1 Lodderomyces elongisporus (strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 / NRRL YB-4239)
Q5GV61 8.16e-05 45 24 4 171 3 clp CRP-like protein Clp Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85)
B2SL05 8.16e-05 45 24 4 171 3 clp CRP-like protein Clp Xanthomonas oryzae pv. oryzae (strain PXO99A)
Q2NYD9 8.16e-05 45 24 4 171 3 clp CRP-like protein Clp Xanthomonas oryzae pv. oryzae (strain MAFF 311018)
Q3BYB3 0.000103 45 24 5 171 3 clp CRP-like protein Clp Xanthomonas euvesicatoria pv. vesicatoria (strain 85-10)
Q8PQ45 0.000103 45 24 5 171 1 clp CRP-like protein Clp Xanthomonas axonopodis pv. citri (strain 306)
Q5BAE9 0.000116 46 26 2 103 3 nte1 Lysophospholipase nte1 Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
Q6CWC2 0.000126 46 25 4 121 3 NTE1 Lysophospholipase NTE1 Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37)
P00515 0.000191 45 27 2 86 1 PRKAR2A cAMP-dependent protein kinase type II-alpha regulatory subunit Bos taurus
A4QVZ8 0.000213 45 27 4 104 3 NTE1 Lysophospholipase NTE1 Pyricularia oryzae (strain 70-15 / ATCC MYA-4617 / FGSC 8958)
Q5A368 0.000268 45 25 6 193 3 NTE1 Lysophospholipase NTE1 Candida albicans (strain SC5314 / ATCC MYA-2876)
Q2UDH2 0.000387 44 26 2 103 3 nte1 Lysophospholipase nte1 Aspergillus oryzae (strain ATCC 42149 / RIB 40)
Q0CNC7 0.000456 44 22 2 144 3 nte1 Lysophospholipase nte1 Aspergillus terreus (strain NIH 2624 / FGSC A1156)
P9WMH3 0.000519 43 21 5 189 1 crp CRP-like cAMP-activated global transcriptional regulator Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WMH2 0.000519 43 21 5 189 1 crp CRP-like cAMP-activated global transcriptional regulator Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63402 0.00053 43 24 1 136 3 BQ2027_MB2593 Uncharacterized ABC transporter ATP-binding protein Mb2593 Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P9WQI5 0.00053 43 24 1 136 1 Rv2564 Uncharacterized ABC transporter ATP-binding protein Rv2564 Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WQI4 0.00053 43 24 1 136 3 MT2640 Uncharacterized ABC transporter ATP-binding protein MT2640 Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P12368 0.000598 43 25 2 85 1 Prkar2a cAMP-dependent protein kinase type II-alpha regulatory subunit Rattus norvegicus
Q1DLC7 0.000708 43 27 2 103 3 NTE1 Lysophospholipase NTE1 Coccidioides immitis (strain RS)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS04830
Feature type CDS
Gene -
Product Crp/Fnr family transcriptional regulator
Location 1026840 - 1027499 (strand: 1)
Length 660 (nucleotides) / 219 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2539
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF00027 Cyclic nucleotide-binding domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0664 Signal transduction mechanisms (T) T cAMP-binding domain of CRP or a regulatory subunit of cAMP-dependent protein kinases

Protein Sequence

MMQNDTPFRELWLKFSEEELLPNADGLFRDAPDLIRNTVTTLHVRNGQNLICQGDPNQAVYVILDGEFIVNKQAENGKQVGLTFCYRGEFLGEMEAICQQAYRYDVIALSDCRVLRMPATAFLTWLAQDHRLSLLLNRQLAKRCLINGEQRLMNAVDSIENNLLYMLTQISGHQIRLPRDMLASILGTSRRHADKVLLRLKTQGKITLDEGVIGLVSTN

Flanking regions ( +/- flanking 50bp)

GTGTTACCGTATTTTCACGATAAATATCTCAGTCTGACCAATTGATAACGATGATGCAAAACGATACCCCGTTTCGTGAATTATGGCTGAAATTCAGTGAAGAAGAGCTTCTGCCCAATGCGGACGGCTTGTTCCGCGATGCACCTGATCTCATCAGAAACACCGTTACCACACTGCATGTCCGTAACGGACAAAACCTTATCTGTCAGGGCGACCCTAACCAGGCGGTTTATGTTATCCTGGACGGCGAGTTTATCGTTAATAAACAAGCGGAAAATGGCAAGCAAGTCGGATTAACTTTTTGTTATCGCGGCGAATTTCTGGGTGAAATGGAAGCTATCTGCCAGCAGGCCTACCGGTATGATGTTATTGCATTATCAGATTGCCGTGTTCTGCGCATGCCGGCAACGGCATTTCTGACCTGGCTTGCTCAGGATCACCGCTTGTCACTGTTGCTTAATCGTCAACTGGCAAAACGTTGTCTGATTAACGGCGAACAGCGCCTGATGAATGCCGTTGATTCTATTGAAAATAACTTACTTTATATGCTGACACAAATCAGTGGTCACCAAATCCGTCTTCCCCGGGATATGCTTGCCAGTATCCTGGGAACCTCCCGGCGCCATGCTGACAAAGTCCTGCTGCGCCTGAAAACTCAGGGGAAAATCACCCTTGATGAGGGCGTGATCGGGCTGGTAAGCACAAACTGATTTATCAGGGATAACATAACCGGAGGAAATACATGTACCGTTTTCAGAAT