Homologs in group_3607

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_19375 EHELCC_19375 100.0 Morganella morganii S2 rnlB Type II toxin-antitoxin system RnlB family antitoxin
NLDBIP_19505 NLDBIP_19505 100.0 Morganella morganii S4 rnlB Type II toxin-antitoxin system RnlB family antitoxin
LHKJJB_19445 LHKJJB_19445 100.0 Morganella morganii S3 rnlB Type II toxin-antitoxin system RnlB family antitoxin
HKOGLL_19385 HKOGLL_19385 100.0 Morganella morganii S5 rnlB Type II toxin-antitoxin system RnlB family antitoxin

Distribution of the homologs in the orthogroup group_3607

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3607

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P52130 1.83e-72 214 78 0 123 1 rnlB Antitoxin RnlB Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_20090
Feature type CDS
Gene rnlB
Product Type II toxin-antitoxin system RnlB family antitoxin
Location 3998 - 4378 (strand: 1)
Length 381 (nucleotides) / 126 (amino acids)
In genomic island -

Contig

Accession contig_47
Length 12696 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3607
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF15933 Antitoxin to bacterial toxin RNase LS or RnlA

Protein Sequence

MFEITGVNISGSLKAVVMATGYENPLSSVNEVEMKLTDLLGQDKSGKILFDLLCANGPEWNRFVTLEMKHGRIILNSAKIIDEHEIPAQVLSKLTFTLRNHPEYLEASVLTPDDVRQVLSVDMQGA

Flanking regions ( +/- flanking 50bp)

ACTAATGACCAAAGCCACTAAAGCGTGGCAAATAATCAAGGATTTGTATCTTGTTTGAAATTACCGGGGTTAACATCTCAGGATCTCTTAAGGCTGTCGTTATGGCGACCGGCTACGAAAACCCGTTGTCTTCAGTCAATGAAGTTGAGATGAAACTCACTGACCTACTGGGCCAGGATAAAAGTGGTAAAATCCTTTTCGATCTCCTATGCGCTAACGGTCCTGAGTGGAACAGATTTGTGACACTTGAAATGAAACATGGCCGCATCATACTGAATTCGGCCAAAATTATTGATGAGCACGAAATACCAGCACAAGTCCTGAGTAAACTGACTTTTACTTTACGGAATCACCCTGAGTACTTAGAAGCGTCCGTATTAACTCCCGATGATGTTCGCCAAGTCCTTTCAGTGGATATGCAAGGGGCTTGATAGTCAGTAAATGAATCATCGCTTCAAAAAATTCCGGATTGGGATCATTG