Homologs in group_3605

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_03490 EHELCC_03490 100.0 Morganella morganii S2 pagN Adhesin/invasin protein PagN
NLDBIP_03490 NLDBIP_03490 100.0 Morganella morganii S4 pagN Adhesin/invasin protein PagN
LHKJJB_09320 LHKJJB_09320 100.0 Morganella morganii S3 pagN Adhesin/invasin protein PagN
HKOGLL_09655 HKOGLL_09655 100.0 Morganella morganii S5 pagN Adhesin/invasin protein PagN

Distribution of the homologs in the orthogroup group_3605

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3605

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZRJ9 4.41e-13 70 28 7 221 1 pagN Outer membrane protein PagN Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8YD01 9.32e-07 52 24 12 277 3 BMEII0376 Uncharacterized protein BMEII0376 Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
Q8FVC3 9.95e-07 52 24 12 277 3 BRA0921 Uncharacterized protein BRA0921/BS1330_II0913 Brucella suis biovar 1 (strain 1330)
Q2YIU6 1.18e-06 52 24 12 277 3 BAB2_0314 Uncharacterized protein BAB2_0314 Brucella abortus (strain 2308)
Q579D9 1.18e-06 52 24 12 277 3 BruAb2_0312 Uncharacterized protein BruAb2_0312 Brucella abortus biovar 1 (strain 9-941)
Q92G43 2.96e-06 50 27 2 141 1 RC1281 Putative adhesin RC1281 Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q05034 2.93e-05 47 22 6 222 3 None Opacity protein opA67 (Fragment) Neisseria gonorrhoeae
Q04883 0.000194 45 23 6 226 1 opaD Opacity protein opA59 (Fragment) Neisseria gonorrhoeae
P11296 0.000838 43 22 7 215 1 opaC Opacity protein opA50 (Fragment) Neisseria gonorrhoeae

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_20040
Feature type CDS
Gene pagN
Product Adhesin/invasin protein PagN
Location 7259 - 8035 (strand: 1)
Length 777 (nucleotides) / 258 (amino acids)

Contig

Accession contig_46
Length 14364 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3605
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF13505 Outer membrane protein beta-barrel domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3637 Cell wall/membrane/envelope biogenesis (M) M Opacity protein LomR and related surface antigens

Protein Sequence

MIKNKLLTGCLLALASAHEFSASQPGFYMSAKAGAGLLKTTDNSLQGSGMTAGALSYNIEKENLKNITDTVFSPGIAVGYQFTGDTYQPVRVELAYQHYGKQDDTMSFSPSVSGYWHNQKNNTFPLPSESSLYMKTKAGTLMVNVYYDIPVNNDISAYLMAGAGAAFIRNDVSWDTNVAGQALSAGASKNVTNLAWSAGAGISWNINENISLDTGYTYTDAGSAENRIVARNGINTATGYTNTDVKLHLLYAGIRYHF

Flanking regions ( +/- flanking 50bp)

CAACCTTTACGCTGGAATATCTTTAATATTAATTTTTCAGGAACAACATAATGATAAAGAATAAATTACTGACAGGTTGCCTGCTGGCGCTGGCTTCCGCACATGAATTTTCCGCGTCACAGCCGGGTTTTTATATGTCGGCTAAAGCCGGTGCCGGGTTATTAAAAACAACAGATAATTCGTTACAGGGATCCGGTATGACAGCAGGTGCGCTGTCATATAATATCGAAAAAGAAAATCTGAAAAATATAACGGATACTGTTTTTTCACCGGGGATAGCGGTGGGATATCAGTTTACCGGTGATACTTATCAGCCTGTCCGTGTTGAACTTGCCTATCAGCACTACGGAAAGCAGGATGATACGATGTCTTTTTCACCGTCTGTTTCCGGTTACTGGCATAACCAGAAAAATAATACCTTTCCGCTGCCGTCAGAGTCTTCACTGTATATGAAAACAAAAGCCGGTACGCTGATGGTGAATGTCTATTATGATATTCCGGTCAATAATGATATCAGCGCATATCTGATGGCAGGCGCGGGTGCGGCATTTATCCGTAATGATGTTTCCTGGGATACCAATGTGGCCGGGCAGGCACTCAGTGCCGGGGCATCAAAAAATGTCACTAATCTGGCATGGTCTGCGGGGGCGGGCATTTCGTGGAATATTAATGAGAATATTTCGCTGGATACCGGTTATACCTATACCGATGCCGGGTCGGCAGAAAACAGAATTGTTGCCCGCAACGGGATTAATACTGCGACAGGTTATACCAATACAGATGTGAAATTACATTTGCTGTATGCCGGGATCCGGTATCATTTTTAATCCGTTTTCCGTCTCTGCGGTTATTTTGCAGAGACGGAAATACCCCGGAT