Homologs in group_3091

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_17100 EHELCC_17100 100.0 Morganella morganii S2 cbiC cobalt-precorrin-8 methylmutase
NLDBIP_18480 NLDBIP_18480 100.0 Morganella morganii S4 cbiC cobalt-precorrin-8 methylmutase
LHKJJB_09145 LHKJJB_09145 100.0 Morganella morganii S3 cbiC cobalt-precorrin-8 methylmutase
HKOGLL_08695 HKOGLL_08695 100.0 Morganella morganii S5 cbiC cobalt-precorrin-8 methylmutase
F4V73_RS13690 F4V73_RS13690 92.8 Morganella psychrotolerans - cobalt-precorrin-8 methylmutase

Distribution of the homologs in the orthogroup group_3091

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3091

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q05601 1.55e-94 277 71 1 210 1 cbiC Cobalt-precorrin-8 methylmutase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
O87692 2.27e-38 135 39 3 201 1 cbiC Cobalt-precorrin-8 methylmutase Priestia megaterium
Q8EXP7 2.8e-38 134 38 6 208 1 cbiC Cobalt-precorrin-8 methylmutase Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601)
Q58340 5.02e-31 115 38 3 175 3 cbiC Cobalt-precorrin-8 methylmutase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P21638 2.75e-29 111 37 5 206 1 cobH Precorrin-8X methylmutase Sinorhizobium sp.
O26329 2.47e-27 106 35 3 191 3 cbiC Cobalt-precorrin-8 methylmutase Methanothermobacter thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta H)
P9WP87 4.4e-24 97 33 5 198 1 cobH Precorrin-8X methylmutase Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P9WP86 4.4e-24 97 33 5 198 3 cobH Precorrin-8X methylmutase Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh)
P63840 4.4e-24 97 33 5 198 3 cobH Precorrin-8X methylmutase Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97)
P74304 1.77e-22 93 33 8 225 3 cbiC Cobalt-precorrin-8 methylmutase Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa)
Q9HZU2 6.77e-20 86 35 5 200 3 cobH Precorrin-8X methylmutase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
O29534 7.91e-14 72 29 5 190 3 cbiHC Cobalamin biosynthesis protein CbiHC Archaeoglobus fulgidus (strain ATCC 49558 / DSM 4304 / JCM 9628 / NBRC 100126 / VC-16)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_18905
Feature type CDS
Gene cbiC
Product cobalt-precorrin-8 methylmutase
Location 24330 - 24959 (strand: -1)
Length 630 (nucleotides) / 209 (amino acids)
In genomic island -

Contig

Accession contig_36
Length 27638 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3091
Orthogroup size 6
N. genomes 6

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Genomic region

Domains

PF02570 Precorrin-8X methylmutase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2082 Coenzyme transport and metabolism (H) H Precorrin-8X methylmutase CbiC/CobH

Kegg Ortholog Annotation(s)

Protein Sequence

MSYIQQPQEIEKNSFLIIDDIIRETRPEYRFASDDHAAIIKRAIHTTADFDWLDILHFSDGVIEILRDGIMRGCTIYTDTTMALSGINKTRLAKYGSECRCYVSDPRVVAAAKEQQMTRSMAAVDIAMQEPGEKIFVFGNAPTALFRVLEHTEKPVAVVGVPVGFVGAAESKDALAESSLPCIAALGRKGGSNVAAAIINAILYRMPEA

Flanking regions ( +/- flanking 50bp)

TGTTCGCCGTCATTCATCTTCTGGCACAGTGGATTTTGTAAGGGAAAAATATGAGTTACATACAACAGCCGCAGGAAATCGAAAAAAACAGTTTTCTGATCATTGATGACATTATCCGCGAAACACGGCCGGAATACCGTTTCGCCAGTGATGATCACGCGGCAATTATCAAACGCGCTATCCATACCACTGCCGATTTTGACTGGCTGGATATCCTGCATTTTTCTGACGGTGTGATTGAAATCCTCCGTGACGGCATTATGCGCGGCTGCACTATTTATACCGATACCACTATGGCACTGTCCGGGATCAACAAAACCCGCCTGGCGAAATACGGTTCAGAGTGCCGCTGCTATGTCAGCGACCCGCGTGTGGTCGCTGCCGCCAAAGAGCAGCAGATGACCCGCTCTATGGCCGCCGTGGATATCGCCATGCAGGAGCCGGGTGAGAAAATTTTTGTCTTCGGCAATGCCCCGACCGCCCTGTTCCGCGTGCTGGAACACACAGAAAAACCGGTTGCCGTTGTCGGCGTGCCGGTCGGTTTTGTCGGCGCGGCAGAATCCAAAGATGCGCTGGCAGAAAGTTCACTGCCGTGTATCGCCGCGCTCGGCCGTAAAGGCGGCAGTAACGTGGCCGCCGCGATTATCAACGCCATCCTTTACCGGATGCCGGAGGCGTAATCATGACGCAGGAAAACATCACAGCACCTGACGATAACGGCACCGGCGTC