Homologs in group_2217

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_16645 EHELCC_16645 100.0 Morganella morganii S2 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
NLDBIP_16855 NLDBIP_16855 100.0 Morganella morganii S4 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
LHKJJB_16615 LHKJJB_16615 100.0 Morganella morganii S3 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
HKOGLL_17580 HKOGLL_17580 100.0 Morganella morganii S5 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
F4V73_RS18415 F4V73_RS18415 88.2 Morganella psychrotolerans rmuC DNA recombination protein RmuC
PMI_RS17570 PMI_RS17570 64.3 Proteus mirabilis HI4320 rmuC DNA recombination protein RmuC

Distribution of the homologs in the orthogroup group_2217

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2217

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZAL8 0.0 548 67 0 401 3 rmuC DNA recombination protein RmuC homolog Yersinia pestis
P0AG73 2.56e-178 511 54 1 468 3 rmuC DNA recombination protein RmuC Shigella flexneri
P0AG71 2.56e-178 511 54 1 468 3 rmuC DNA recombination protein RmuC Escherichia coli (strain K12)
P0AG72 2.56e-178 511 54 1 468 3 rmuC DNA recombination protein RmuC Escherichia coli O157:H7
P0A2B7 8.88e-176 504 63 0 390 3 rmuC DNA recombination protein RmuC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2B8 8.88e-176 504 63 0 390 3 rmuC DNA recombination protein RmuC Salmonella typhi
Q9KVQ7 1.98e-157 459 54 2 424 3 rmuC DNA recombination protein RmuC homolog Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9I4U3 3.87e-109 333 46 6 395 3 rmuC DNA recombination protein RmuC homolog Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9JXH2 3.66e-107 333 45 4 379 3 rmuC DNA recombination protein RmuC homolog Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JWG3 4.61e-106 330 46 3 363 3 rmuC DNA recombination protein RmuC homolog Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q9CLG7 1.95e-84 271 38 2 378 3 rmuC DNA recombination protein RmuC homolog Pasteurella multocida (strain Pm70)
P44733 9.92e-78 252 36 1 357 3 rmuC DNA recombination protein RmuC homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9REQ3 1.09e-48 176 30 10 437 3 rmuC DNA recombination protein RmuC homolog Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
O84832 2.13e-29 122 28 5 276 3 rmuC DNA recombination protein RmuC homolog Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9PL95 1.84e-28 120 27 6 322 3 rmuC DNA recombination protein RmuC homolog Chlamydia muridarum (strain MoPn / Nigg)
Q9Z6S7 5.61e-25 110 27 6 268 3 rmuC DNA recombination protein RmuC homolog Chlamydia pneumoniae
Q92GR5 5.39e-13 74 25 7 237 3 rmuC DNA recombination protein RmuC homolog Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q4UMY2 5.69e-13 74 25 7 237 3 rmuC DNA recombination protein RmuC homolog Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q1RJ81 9.17e-12 70 24 7 237 3 rmuC DNA recombination protein RmuC homolog Rickettsia bellii (strain RML369-C)
Q68W48 1.13e-11 70 25 5 236 3 rmuC DNA recombination protein RmuC homolog Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q9ZCN3 1.88e-11 69 24 5 236 3 rmuC DNA recombination protein RmuC homolog Rickettsia prowazekii (strain Madrid E)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16945
Feature type CDS
Gene rmuC
Product DNA anti-recombination protein (rearrangement mutator) RmuC
Location 16465 - 17889 (strand: -1)
Length 1425 (nucleotides) / 474 (amino acids)

Contig

Accession contig_26
Length 47760 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2217
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02646 RmuC family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1322 Replication, recombination and repair (L) L DNA anti-recombination protein (rearrangement mutator) RmuC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09760 DNA recombination protein RmuC - -

Protein Sequence

MDIQWLYGFIGILSGILLGGGVVWFSLQQRLADKNRLLQDNIAQLALLDETRRQAAYWQQAREQSEQSLENARHISAQQEAEIRELTTRLEESRLAAEEKQRLLLNSEQRLNTQFENLAARIFEQSGRRTDELNRQSLSMLLRPFREQLDNFNRQVQESYSQESRERHTLTHEIQRLQQLNLRMAQEAVNLTNALKGDNKMQGNWGETILARILEASGLREGHEFATQVSLKNEQQSRYQPDVVIYLPQNKQVIVDAKVSLVAYERYFNSDTPEARQTALTEHINSVRQHIRGLSRKEYQDLSGINSLDYVLMFIPVEPAFLAAVGQESVLLDEALRSNIMLVSPSTLLVALRTIANLWRYEHQHENSQAIAQRAARLYDKLRLFTEEMDGIGQALDKAQSTYHGAMKKLTTGRGNLLSQAESFRELGVEVKRPLDEILVQKARLSEQQDTAADELPEEPANFAEQHNGHRVLR

Flanking regions ( +/- flanking 50bp)

TGCTATTTTACCGTAAGCGGCGTAAGTGACTCGCGGAGGAGACGGCCATCGTGGATATTCAGTGGCTTTATGGTTTTATCGGCATTCTGAGCGGTATTCTGCTGGGCGGCGGTGTGGTCTGGTTCAGCCTGCAACAGCGGCTGGCGGACAAAAACCGGCTGTTACAGGATAATATTGCGCAACTGGCTCTGCTGGATGAAACCCGGCGTCAGGCTGCATACTGGCAGCAGGCCAGGGAGCAGAGTGAACAGTCACTGGAAAATGCCCGTCATATCAGTGCACAACAGGAAGCGGAAATCCGGGAGCTGACTACCCGGCTGGAAGAAAGCCGCCTGGCTGCTGAAGAAAAACAGCGGCTGCTGCTTAACAGTGAGCAGCGCCTGAATACTCAGTTTGAAAACCTGGCCGCCCGTATTTTTGAACAGAGTGGCCGCCGGACAGATGAACTCAACCGCCAGAGCCTGTCCATGCTGCTGCGCCCGTTCCGTGAACAGCTGGATAACTTTAACCGGCAGGTGCAGGAAAGTTACAGCCAGGAAAGCCGCGAGCGTCATACCCTGACACATGAAATTCAGCGCCTGCAGCAGCTCAATCTGCGGATGGCGCAGGAAGCCGTCAATCTCACCAATGCCCTGAAAGGCGACAACAAAATGCAGGGTAACTGGGGAGAAACTATTCTTGCCCGTATCCTGGAAGCCTCCGGTCTGCGCGAGGGGCATGAATTCGCCACTCAGGTCAGTCTGAAAAATGAACAGCAAAGCCGTTATCAGCCCGATGTGGTGATTTACCTGCCGCAGAACAAACAGGTGATTGTGGATGCCAAAGTATCGCTGGTGGCCTACGAGCGTTACTTCAACAGTGACACCCCGGAAGCCCGGCAGACGGCACTGACGGAACATATCAACTCTGTGCGTCAGCATATCCGCGGCCTGAGCCGCAAAGAATATCAGGATCTCAGCGGGATTAACTCACTGGACTATGTACTGATGTTTATCCCTGTCGAACCGGCGTTTCTGGCGGCGGTCGGGCAGGAGAGTGTATTGCTGGATGAAGCCCTCAGAAGCAATATCATGCTGGTCAGCCCGTCCACACTGCTGGTGGCGCTGCGGACAATCGCCAATCTCTGGCGTTATGAACATCAGCATGAAAACAGTCAGGCAATTGCACAGCGTGCCGCCCGTCTCTATGACAAACTCCGCCTGTTTACCGAGGAAATGGACGGTATCGGCCAGGCGCTGGATAAAGCCCAGAGCACGTACCACGGGGCGATGAAAAAACTGACCACCGGCCGGGGAAATCTGCTGTCACAGGCAGAAAGCTTCAGGGAGCTGGGCGTTGAGGTAAAACGCCCGCTGGATGAAATTCTGGTGCAGAAAGCCCGTCTCAGTGAACAGCAGGATACCGCTGCGGATGAACTACCGGAGGAGCCGGCTAATTTCGCAGAACAACACAATGGGCATAGGGTTTTGCGGTAAAGGCTGATACACTTTTCCGATCACTAATTCATGCACACAGGCAAAACAGG