Homologs in group_2217

Help

6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16945 FBDBKF_16945 64.3 Morganella morganii S1 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
EHELCC_16645 EHELCC_16645 64.3 Morganella morganii S2 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
NLDBIP_16855 NLDBIP_16855 64.3 Morganella morganii S4 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
LHKJJB_16615 LHKJJB_16615 64.3 Morganella morganii S3 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
HKOGLL_17580 HKOGLL_17580 64.3 Morganella morganii S5 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
F4V73_RS18415 F4V73_RS18415 63.9 Morganella psychrotolerans rmuC DNA recombination protein RmuC

Distribution of the homologs in the orthogroup group_2217

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2217

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZAL8 0.0 554 63 1 431 3 rmuC DNA recombination protein RmuC homolog Yersinia pestis
P0AG73 0.0 531 58 5 455 3 rmuC DNA recombination protein RmuC Shigella flexneri
P0AG71 0.0 531 58 5 455 3 rmuC DNA recombination protein RmuC Escherichia coli (strain K12)
P0AG72 0.0 531 58 5 455 3 rmuC DNA recombination protein RmuC Escherichia coli O157:H7
P0A2B7 0.0 520 62 0 407 3 rmuC DNA recombination protein RmuC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2B8 0.0 520 62 0 407 3 rmuC DNA recombination protein RmuC Salmonella typhi
Q9KVQ7 5.74e-153 446 54 0 406 3 rmuC DNA recombination protein RmuC homolog Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9JXH2 1.45e-110 341 45 5 405 3 rmuC DNA recombination protein RmuC homolog Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9I4U3 7.22e-110 334 46 2 346 3 rmuC DNA recombination protein RmuC homolog Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9JWG3 2e-109 338 45 5 405 3 rmuC DNA recombination protein RmuC homolog Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P44733 1.33e-81 261 37 2 382 3 rmuC DNA recombination protein RmuC homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9CLG7 8.06e-81 261 36 3 409 3 rmuC DNA recombination protein RmuC homolog Pasteurella multocida (strain Pm70)
Q9REQ3 5.48e-51 181 29 9 437 3 rmuC DNA recombination protein RmuC homolog Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
O84832 6.25e-28 118 29 6 268 3 rmuC DNA recombination protein RmuC homolog Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9Z6S7 3.07e-27 115 30 7 267 3 rmuC DNA recombination protein RmuC homolog Chlamydia pneumoniae
Q9PL95 6.33e-26 112 28 6 269 3 rmuC DNA recombination protein RmuC homolog Chlamydia muridarum (strain MoPn / Nigg)
Q4UMY2 1.46e-13 75 25 4 236 3 rmuC DNA recombination protein RmuC homolog Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q68W48 1.54e-13 75 26 6 237 3 rmuC DNA recombination protein RmuC homolog Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q92GR5 2.38e-13 75 25 4 236 3 rmuC DNA recombination protein RmuC homolog Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q9ZCN3 4.5e-13 74 25 5 240 3 rmuC DNA recombination protein RmuC homolog Rickettsia prowazekii (strain Madrid E)
Q1RJ81 6.45e-13 73 25 4 236 3 rmuC DNA recombination protein RmuC homolog Rickettsia bellii (strain RML369-C)
Q87AZ9 3.87e-06 52 26 13 292 3 rmuC DNA recombination protein RmuC homolog Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q9PG89 4.58e-06 52 26 13 292 3 rmuC DNA recombination protein RmuC homolog Xylella fastidiosa (strain 9a5c)

  • Number of RefSeq hits:

General

Source Proteus mirabilis HI4320
Locus tag PMI_RS17570
Feature type CDS
Gene rmuC
Product DNA recombination protein RmuC
Location 3856854 - 3858194 (strand: 1)
Length 1341 (nucleotides) / 446 (amino acids)

Contig

Accession NC_010554
Length 4063606 nucleotides
Topology circular
Plasmid False

Orthology

Orthogroup group_2217
Orthogroup size 7
N. genomes 7

Actions

Genomic region

Domains

PF02646 RmuC family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1322 Replication, recombination and repair (L) L DNA anti-recombination protein (rearrangement mutator) RmuC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09760 DNA recombination protein RmuC - -

Protein Sequence

MDIQLLYGIIGLLGGVLVGGIAVWWLIQQRLAEKENLLRENYTQLAVAQQKALVIPSLQQQIAHLEQELRAQREIITSQEAELREVTTRWEESRISAEEKQRLLLNSEQRLATQFENLANRIFEQSGRKAQELNRQGLTHLLSPFREQLESFRRQVQEGFGQEARERHTLVHEIRQLQQLNVKMAQEAVNLTNALKGDNKIQGNWGETVLARILESSGLREGHEFETQVSIRHENGSRYQPDVIVHLPHRRDVIIDAKMSLIAYERYFNSSDENEQKQALHAHVNSIRAHIKGLSLKDYHKLPGVTSLDYVLMFIPIEPAYLVAIGHSPDLLEEALKNNIMLVGPSTLLVALRTIAALWRYEYQSQNAQEIADRAAKMYDKLRLFVDDMQGLGNSIQKAQSGYLLAMKKLSEGRGNLISQAEGFKSLGVEIKKTIDNDLVEKSASD

Flanking regions ( +/- flanking 50bp)

TTACTGATGCGTTTTAACGTAGCCCGCTAGAAAATAAAAAGGTTACTTGAGTGGATATTCAGTTGTTATACGGGATCATTGGTTTATTAGGCGGTGTATTGGTGGGGGGGATCGCCGTTTGGTGGCTTATCCAACAACGCTTAGCCGAAAAAGAAAACCTATTACGTGAAAATTATACTCAGCTTGCGGTTGCACAACAAAAAGCATTGGTGATCCCTTCTTTACAACAACAGATAGCGCATTTAGAGCAAGAGTTACGTGCACAACGTGAAATAATTACTTCTCAAGAGGCCGAATTAAGGGAAGTGACCACGCGTTGGGAAGAGAGCCGAATATCCGCTGAAGAGAAACAGCGTTTACTGCTTAATAGTGAACAACGACTAGCCACTCAGTTTGAAAATCTGGCTAACCGCATTTTTGAGCAAAGTGGACGTAAAGCGCAAGAGCTTAATCGTCAAGGTTTAACCCATCTCCTTTCTCCATTTCGAGAGCAACTAGAGAGTTTTCGTCGGCAGGTACAAGAAGGTTTTGGACAAGAAGCGCGAGAAAGGCATACACTGGTACATGAAATTCGCCAACTGCAACAACTCAATGTCAAAATGGCGCAAGAAGCCGTTAATCTGACTAATGCCTTAAAAGGGGATAATAAAATCCAAGGCAACTGGGGAGAAACGGTATTAGCGCGGATCTTAGAGTCATCTGGTTTACGCGAAGGGCACGAGTTTGAAACTCAAGTCAGTATTCGCCATGAAAATGGCAGTCGTTATCAACCCGATGTGATTGTGCATTTACCGCATCGTCGAGATGTGATTATTGATGCCAAAATGTCGCTGATTGCTTATGAAAGATACTTTAATAGCAGTGATGAGAATGAACAAAAACAAGCGCTGCATGCTCATGTGAACTCTATCAGAGCGCACATTAAAGGCTTAAGTCTCAAAGATTATCATAAGCTACCGGGAGTGACTTCGTTAGACTACGTTTTAATGTTTATACCGATAGAGCCTGCTTACCTCGTTGCTATTGGTCATTCTCCAGATTTATTAGAAGAAGCATTGAAAAATAATATAATGTTGGTTGGGCCATCTACTTTACTTGTTGCTTTGCGTACAATAGCCGCATTGTGGCGTTATGAATACCAAAGCCAAAATGCGCAAGAAATTGCTGATAGAGCGGCTAAAATGTATGACAAATTAAGACTTTTCGTTGATGATATGCAAGGGCTAGGTAATAGCATTCAAAAAGCGCAATCGGGCTATCTATTAGCGATGAAAAAACTCTCTGAAGGTCGTGGAAACCTTATCAGCCAAGCAGAAGGCTTTAAATCCTTAGGGGTTGAGATAAAAAAGACCATTGATAATGATCTGGTTGAAAAATCAGCTTCTGATTGATTTACATAAATAAAAATAGCGGTTTCCGGGCAAGAAATGTACTGAATTTA