Homologs in group_2952

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_15655 FBDBKF_15655 28.4 Morganella morganii S1 - site-specific DNA-methyltransferase (adenine-specific)
EHELCC_16010 EHELCC_16010 28.4 Morganella morganii S2 - site-specific DNA-methyltransferase (adenine-specific)
NLDBIP_16355 NLDBIP_16355 28.4 Morganella morganii S4 - site-specific DNA-methyltransferase (adenine-specific)
LHKJJB_16445 LHKJJB_16445 28.4 Morganella morganii S3 - site-specific DNA-methyltransferase (adenine-specific)
HKOGLL_16215 HKOGLL_16215 28.4 Morganella morganii S5 - site-specific DNA-methyltransferase (adenine-specific)

Distribution of the homologs in the orthogroup group_2952

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2952

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P10484 0.0 963 90 0 517 1 hsdM Type I restriction enzyme EcoR124I/EcoR124II methylase subunit Escherichia coli
Q47163 0.0 961 90 0 517 3 hsdM Type I restriction enzyme EcoprrI methylase subunit Escherichia coli
P75436 9.87e-147 434 45 8 530 1 MPN_342 Type I restriction enzyme MpnII methylase subunit Mycoplasma pneumoniae (strain ATCC 29342 / M129 / Subtype 1)
Q58617 2.56e-41 159 33 10 341 3 MJ1220 Type I restriction enzyme MjaVIII methylase subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q60297 8.92e-41 157 25 20 541 3 MJECL42 Type I restriction enzyme MjaIX methylase subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57596 2.45e-39 154 31 10 330 3 MJ0132 Type I restriction enzyme MjaVII methylase subunit Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q57168 2.06e-34 137 30 13 350 1 hsdM Type I restriction enzyme HindI methylase subunit Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q89Z59 3.77e-21 99 22 6 358 1 hsdM Type I restriction enzyme BthVORF4518P methylase subunit Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50)
P07989 1.04e-20 99 27 8 300 3 hsdM Type I restriction enzyme StySPI methylase subunit Salmonella potsdam
P40813 1.44e-20 98 27 9 308 3 hsdM Type I restriction enzyme StySJI methylase subunit Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P08957 3.73e-20 97 27 9 295 1 hsdM Type I restriction enzyme EcoKI methylase subunit Escherichia coli (strain K12)
Q47282 1.15e-17 89 26 16 364 3 hsdM Type I restriction enzyme EcoEI methylase subunit Escherichia coli

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_16615
Feature type CDS
Gene -
Product type I restriction-modification system subunit M
Location 6592 - 8148 (strand: -1)
Length 1557 (nucleotides) / 518 (amino acids)

Contig

Accession contig_25
Length 47933 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2952
Orthogroup size 6
N. genomes 5

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Genomic region

Domains

PF02384 N-6 DNA Methylase
PF12161 HsdM N-terminal domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0286 Defense mechanisms (V) V Type I restriction-modification system, DNA methylase subunit

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03427 type I restriction enzyme M protein [EC:2.1.1.72] - -

Protein Sequence

MTSLQQRAELHRQIWQIANDVRGSVDGWDFKQYVLGALFYRFISENFVSYIEAGDDSIRYATLDDGIITDDIKDDAVRTKGYFIYPSQLFCNVAAKANTNDRLNADLNSIFVAIESSASGYPSEPDIKGLFADFDTTSNRLGNTVKDKNSRLAAVLKGVEGLKLGNFAEHQIDLFGDAYEFLISNYAANAGKSGGEFFTPQHVSKLIAQLALHGQKQVNKIYDPAAGSGSLLLQAKKHFDNHIIEDGFFGQEINHTTFNLARMNMFLHNINYDKFYIRLGNTLLEPEFKDEKPFDAIVSNPPYSVKWVGSDDPTLINDDRFAPAGVLAPKSKADFAFVLHALNYLSARGRAAIVCFPGIFYRGGAEQKIRQYLVDNNYVETVISLAPNLFFGTTIAVNILVLSKHKTDTNVQFIDASGLFKKETNNNILTDDHIADIMRVFDSKADTDYLAKSVPAEAVAANDYNLSVSSYVEAKDTREVINITELNAELKTTVAKIDQLRKEIDTIVAEIEGNEAQL

Flanking regions ( +/- flanking 50bp)

CACTGACCGGATAATGACTGTGCTCACCGAAATTTAAAACAGGACAACGAATGACAAGTTTGCAGCAACGTGCTGAATTACACCGCCAAATCTGGCAAATCGCCAATGATGTCCGTGGCTCTGTTGATGGCTGGGATTTTAAACAATACGTTCTCGGTGCTCTTTTTTACCGTTTTATCAGTGAAAACTTTGTCAGTTACATTGAAGCCGGGGATGACAGTATCCGGTACGCTACGCTTGATGACGGTATTATCACGGACGATATCAAAGACGATGCGGTCAGAACGAAGGGCTATTTTATTTACCCCAGCCAGCTTTTTTGCAATGTGGCAGCGAAAGCAAACACCAATGACAGGCTGAATGCGGATTTAAACAGTATTTTTGTGGCGATAGAAAGCTCAGCATCCGGTTATCCGTCTGAGCCGGATATCAAAGGACTGTTTGCCGATTTTGATACCACCAGCAACCGGCTGGGTAACACCGTTAAAGATAAAAACAGCCGCCTGGCGGCTGTGCTGAAAGGGGTTGAGGGGTTAAAGCTCGGTAACTTCGCTGAACATCAGATTGACCTGTTCGGGGATGCCTATGAGTTTCTGATATCAAACTACGCGGCGAATGCCGGTAAGTCAGGCGGGGAGTTCTTTACTCCTCAGCATGTTTCAAAACTGATTGCTCAGCTGGCACTGCATGGTCAGAAGCAGGTAAATAAAATTTATGACCCGGCGGCAGGCTCCGGCTCTCTGCTGTTGCAGGCTAAAAAACACTTTGATAATCACATTATTGAAGACGGCTTTTTCGGTCAGGAGATTAACCATACGACCTTTAACCTTGCGCGTATGAACATGTTCCTGCACAACATCAACTATGACAAATTCTATATCCGGCTGGGGAATACCCTGCTGGAACCTGAGTTTAAAGATGAAAAACCGTTTGATGCGATAGTGTCTAACCCGCCGTATTCGGTGAAATGGGTCGGCAGTGATGATCCGACACTGATTAACGATGACCGTTTTGCACCCGCCGGGGTACTGGCACCGAAGTCTAAAGCGGACTTTGCGTTTGTACTGCACGCACTGAATTACCTGTCAGCCAGAGGCCGGGCTGCTATTGTCTGCTTCCCGGGGATTTTCTACCGTGGTGGCGCGGAGCAAAAAATCCGTCAGTACCTGGTGGATAATAACTATGTTGAAACCGTGATTTCACTGGCCCCGAACCTGTTCTTCGGTACGACAATTGCCGTTAATATTCTGGTGCTGTCAAAGCATAAAACAGACACGAACGTGCAGTTTATTGATGCCAGTGGTTTATTTAAAAAAGAAACCAACAACAATATTCTGACTGACGACCATATCGCTGACATCATGCGGGTGTTCGACAGTAAAGCCGATACTGACTATCTGGCCAAATCCGTTCCGGCTGAAGCCGTTGCCGCCAATGATTACAACCTGTCAGTCAGCAGTTATGTTGAAGCAAAAGATACCCGCGAAGTGATTAATATCACGGAGCTAAACGCTGAGCTGAAAACGACCGTCGCTAAAATTGACCAGCTACGCAAAGAGATTGATACGATTGTCGCAGAAATCGAAGGTAATGAGGCACAGTTATGAGTGAGCTGAATTATCTGGAAAAGCTCCTGGACGGGGCTGAAGTTGAGTGG