Homologs in group_3430

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_07850 EHELCC_07850 100.0 Morganella morganii S2 - YqaE/Pmp3 family membrane protein
NLDBIP_08175 NLDBIP_08175 100.0 Morganella morganii S4 - YqaE/Pmp3 family membrane protein
LHKJJB_06090 LHKJJB_06090 100.0 Morganella morganii S3 - YqaE/Pmp3 family membrane protein
HKOGLL_04825 HKOGLL_04825 100.0 Morganella morganii S5 - YqaE/Pmp3 family membrane protein

Distribution of the homologs in the orthogroup group_3430

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3430

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_14430
Feature type CDS
Gene -
Product YqaE/Pmp3 family membrane protein
Location 85212 - 85367 (strand: -1)
Length 156 (nucleotides) / 51 (amino acids)

Contig

Accession contig_18
Length 100673 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3430
Orthogroup size 5
N. genomes 5

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Genomic region

Protein Sequence

MPFILLWIGLALLLGFIASGSGRSFWAWFVLGVVIDPILAGLLYLLIARDA

Flanking regions ( +/- flanking 50bp)

CTTGTTATTTTTTGTCATTAATAATGATTTTTTCATAAGGGAATTTATTTATGCCATTTATTCTGCTTTGGATTGGGCTTGCATTGTTGCTGGGTTTTATCGCTTCAGGTAGTGGACGTTCATTCTGGGCTTGGTTTGTTCTGGGTGTTGTTATTGATCCTATACTGGCTGGGTTACTGTATTTATTAATAGCCCGGGATGCCTGACCATGTTTAAAGAATTTATAAAAAGACAGCTTGTTATCATTTTTAAATGG