Homologs in group_1857

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_11555 EHELCC_11555 100.0 Morganella morganii S2 - PELOTA RNA-binding domain-containing protein
NLDBIP_11900 NLDBIP_11900 100.0 Morganella morganii S4 - PELOTA RNA-binding domain-containing protein
LHKJJB_11760 LHKJJB_11760 100.0 Morganella morganii S3 - PELOTA RNA-binding domain-containing protein
HKOGLL_10370 HKOGLL_10370 100.0 Morganella morganii S5 - PELOTA RNA-binding domain-containing protein
F4V73_RS12750 F4V73_RS12750 82.7 Morganella psychrotolerans - cysteine protease StiP family protein
PMI_RS11830 PMI_RS11830 66.9 Proteus mirabilis HI4320 - cysteine protease StiP family protein

Distribution of the homologs in the orthogroup group_1857

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1857

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6FAX7 8.13e-105 316 48 5 365 1 stiP Cysteine protease StiP Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_13885
Feature type CDS
Gene -
Product PELOTA RNA-binding domain-containing protein
Location 71190 - 72269 (strand: 1)
Length 1080 (nucleotides) / 359 (amino acids)

Contig

Accession contig_17
Length 103646 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1857
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11202 Tellurite-like stress resistance cysteine protease StiP
PF15608 PELOTA RNA binding domain

Protein Sequence

MYNFLPFSGSYLPDDVQFLLRPVTIDMTPVELKEQLIQSGQKHYSDMLSQEPAPTDWHLDLFNRALKKGAPRLARDVSALARTLGGYFADQPVVLVSLVRAGVPLGVMLHQALRDAGKISHHYGISIIRDRGIDTAALEWIEHHHGTAGIVFVDGWTGKGAITGELIRSLKDRPGYPADPRLVVLADPAGCAWLSAADDDWLIPSGIMGAPVSGLISRSVWSETGPHGCVHCEHLQPYECSRTLTDTVAALRRQETAVPAAAFPDPDTKTALRKKSRAVITALAERCGVNDLNRIKPGIAEATRAVLRRVPDHVFVRDCTEPDVELLLYLARQKGITITEAGDALGQYRAVTIIRKVSP

Flanking regions ( +/- flanking 50bp)

CAGTCAGTTTGCGGAGGCAGTCGCCGCCCGGATTTTCAGTGAGGTATCCGATGTATAATTTCCTGCCGTTCTCAGGCAGTTATCTGCCGGATGATGTGCAGTTTCTGCTCCGGCCGGTCACCATTGATATGACCCCGGTGGAACTGAAAGAGCAGCTGATTCAGTCCGGACAGAAACACTATTCCGATATGCTCAGCCAGGAGCCCGCTCCCACAGACTGGCATCTTGATCTGTTTAACCGCGCACTGAAAAAAGGTGCACCGCGTCTGGCGCGGGATGTGAGCGCCCTCGCCCGTACACTGGGTGGCTATTTTGCAGATCAGCCGGTTGTGCTGGTCAGCCTGGTCCGCGCCGGTGTGCCGTTAGGGGTGATGCTGCATCAGGCGCTGCGTGATGCGGGAAAAATCTCACACCATTACGGCATCAGTATTATCCGCGATCGCGGTATTGATACGGCGGCGCTGGAGTGGATCGAACACCATCACGGCACCGCCGGTATTGTGTTTGTTGACGGCTGGACAGGTAAAGGCGCCATCACCGGTGAACTGATCCGCTCCCTGAAAGACAGACCCGGCTACCCGGCCGATCCGCGTCTGGTGGTGCTGGCCGATCCTGCCGGATGCGCCTGGCTCTCCGCTGCGGATGATGACTGGCTGATCCCCTCCGGGATTATGGGGGCGCCGGTTTCCGGGCTTATCTCCCGCTCTGTCTGGTCGGAGACCGGCCCGCACGGCTGTGTGCATTGTGAGCACTTACAACCTTATGAGTGCAGCCGGACACTCACCGATACCGTTGCTGCCCTGCGCCGTCAGGAAACTGCGGTTCCGGCTGCAGCCTTTCCGGATCCTGACACTAAAACCGCACTGCGGAAAAAAAGCCGCGCGGTGATCACCGCACTGGCTGAACGCTGCGGCGTCAACGATCTGAACAGAATCAAACCCGGCATTGCCGAAGCCACCCGTGCTGTCCTGCGCCGGGTGCCGGATCACGTCTTTGTGCGCGACTGCACAGAGCCGGATGTGGAATTGCTGCTTTATCTCGCCCGTCAGAAAGGGATCACTATCACGGAAGCCGGCGATGCCCTCGGGCAGTACCGCGCCGTCACTATTATCAGGAAGGTATCACCATGACCCGACGTCTCTCCCCGTGGAATTTAGGGGCCTCACTCTATATGCCCGCC