Homologs in group_1895

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13885 FBDBKF_13885 82.7 Morganella morganii S1 - PELOTA RNA-binding domain-containing protein
EHELCC_11555 EHELCC_11555 82.7 Morganella morganii S2 - PELOTA RNA-binding domain-containing protein
NLDBIP_11900 NLDBIP_11900 82.7 Morganella morganii S4 - PELOTA RNA-binding domain-containing protein
LHKJJB_11760 LHKJJB_11760 82.7 Morganella morganii S3 - PELOTA RNA-binding domain-containing protein
HKOGLL_10370 HKOGLL_10370 82.7 Morganella morganii S5 - PELOTA RNA-binding domain-containing protein
PMI_RS11830 PMI_RS11830 67.4 Proteus mirabilis HI4320 - cysteine protease StiP family protein

Distribution of the homologs in the orthogroup group_1895

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1895

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6FAX7 1.67e-109 328 49 4 365 1 stiP Cysteine protease StiP Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS12750
Feature type CDS
Gene -
Product cysteine protease StiP family protein
Location 149836 - 150915 (strand: 1)
Length 1080 (nucleotides) / 359 (amino acids)
In genomic island -

Contig

Accession NZ_VXKB01000003
Length 425895 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1895
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF11202 Tellurite-like stress resistance cysteine protease StiP
PF15608 PELOTA RNA binding domain

Protein Sequence

MYDFPEFSGSYLPEDVQFLLKPITLDMTPVALKEQLIQSGKKHYSDMLSQEPAPTAWHLDLFNRALEKGAPRLARDVAFLTQALSNHFTEQPIVLVSLVRAGVPLGVMLHQALRDAGKTSYHYGISIIRDRGIDTAALEWIEHHHGTAGIVFVDGWTGKGAITGELIRSLHNRPGYPADPRLVVLADPAGCAWLSAADDDWLIPSGIMGAPVSGLISRSVWSDKGPHGCVHCEHLQQYECSRLLTDTVAGLRRKLTSTPVITLSDPQYKAELRAKSKTVIDTLAAHYGLADLNRLKPGIAEATRAVLRRVPEHVLVRDCNEPDVELLVYLARQKNITITQAGDALGQYRAVTIIKKVSP

Flanking regions ( +/- flanking 50bp)

CAGCCAGTTCGCTGATGCTATCGCCCGCCGGATATTCAGTGAGGTGAAAGATGTATGATTTTCCTGAATTTTCAGGCAGTTATTTGCCGGAAGATGTGCAGTTTCTGCTCAAACCCATCACGCTTGATATGACGCCGGTTGCATTAAAAGAACAACTTATTCAGTCCGGTAAAAAACATTACTCCGATATGCTCAGTCAGGAGCCGGCGCCCACCGCCTGGCATCTTGATCTGTTTAACCGGGCGCTGGAAAAGGGCGCGCCCCGCCTGGCGCGTGATGTTGCGTTTCTCACGCAAGCCCTGAGCAACCATTTTACAGAGCAACCCATTGTCCTGGTGAGCCTTGTCCGCGCAGGTGTACCCTTAGGGGTGATGCTGCATCAGGCACTGCGTGATGCGGGAAAAACCTCATATCATTACGGGATAAGCATCATCCGCGACCGGGGCATTGATACTGCCGCGCTGGAGTGGATTGAGCATCACCACGGAACCGCCGGTATTGTGTTTGTCGATGGCTGGACAGGCAAAGGGGCTATTACAGGTGAATTAATTCGCTCACTGCATAACCGTCCTGGCTATCCGGCTGATCCCCGCCTGGTTGTGCTCGCCGATCCCGCAGGTTGCGCCTGGCTTTCTGCCGCAGACGATGACTGGCTGATCCCGTCCGGCATTATGGGCGCACCGGTTTCCGGGCTTATCTCCCGCTCCGTCTGGTCAGATAAGGGTCCGCACGGCTGCGTACATTGTGAACACTTGCAGCAATATGAATGCAGCCGCCTGCTGACAGATACAGTTGCAGGATTGCGCCGTAAACTCACCAGTACGCCGGTGATAACATTATCTGATCCGCAGTACAAAGCAGAATTGCGGGCAAAAAGTAAAACAGTCATCGACACACTGGCTGCGCATTATGGACTGGCGGATCTCAACCGGCTGAAACCCGGCATTGCCGAAGCGACCCGGGCGGTGCTGCGCCGCGTGCCGGAGCACGTTTTAGTCCGCGACTGTAATGAACCGGATGTGGAATTGCTGGTTTATCTGGCGCGTCAGAAAAATATTACTATTACGCAAGCGGGTGATGCCCTGGGGCAATACCGCGCCGTTACTATTATCAAAAAGGTATCACCATGACACAGCGTCTCTCTCCCTGGAATTTAGGGGCGTCACTCTATATGCCTGCA