Homologs in group_1789

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_08915 EHELCC_08915 100.0 Morganella morganii S2 - Antitermination protein
NLDBIP_09240 NLDBIP_09240 100.0 Morganella morganii S4 - Antitermination protein
LHKJJB_05025 LHKJJB_05025 100.0 Morganella morganii S3 - Antitermination protein
HKOGLL_05890 HKOGLL_05890 100.0 Morganella morganii S5 - Antitermination protein
F4V73_RS02035 F4V73_RS02035 58.8 Morganella psychrotolerans - antitermination protein
PMI_RS08450 PMI_RS08450 35.2 Proteus mirabilis HI4320 - antitermination protein

Distribution of the homologs in the orthogroup group_1789

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1789

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76161 1.06e-46 159 35 4 259 3 quuQ Prophage antitermination protein Q homolog QuuQ Escherichia coli (strain K12)
P03047 6.73e-45 153 36 5 261 1 Q Antitermination protein Q Escherichia phage lambda
P57020 3.5e-44 151 37 6 261 3 23 Antitermination protein Q Salmonella phage P22
Q02582 3.64e-43 148 35 5 260 3 Q Antitermination protein Q Escherichia phage HK022
O80286 4.41e-43 148 35 5 261 3 23 Antitermination protein Q Bacteriophage PS34

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_13180
Feature type CDS
Gene -
Product Antitermination protein
Location 25442 - 26227 (strand: -1)
Length 786 (nucleotides) / 261 (amino acids)

Contig

Accession contig_16
Length 109220 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1789
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF03589 Antitermination protein

Protein Sequence

MKLESALKQFHPKSPTFSDSSNSTAPDRLKGMDSAAAMGMASQRAAFGMHAFFGKNDVSIEDKFRTVEALTQYALRTVPKLVAKAAGNRVAQCMKILSAMAFEDYARSAGSVCQCQDCGGKGLIYRRKEVVKHPGITNMEGTVIVEPVVRNERVGELCTTCNGKGQLTHRCRCKGRGKVYDEEQSELQGAPVFKDCPKCSGRGYKRVPSSVAYQAIKHLVPELTQPTWSRNWKPFYESLSGKCYIEESHANSVFSIVTSRK

Flanking regions ( +/- flanking 50bp)

GAAGTCCGTGAACTGACATTTTACCGGGAAAAACACCAGGAGGCTGCGTAATGAAACTCGAAAGCGCATTAAAACAATTTCATCCGAAGTCACCGACATTCAGTGACAGCTCAAACTCCACGGCCCCGGACAGACTGAAAGGCATGGATTCGGCAGCGGCAATGGGTATGGCGTCACAGCGGGCCGCGTTTGGTATGCATGCGTTCTTTGGTAAGAATGACGTCAGCATTGAGGACAAATTCAGGACGGTTGAAGCGCTGACACAGTATGCTCTGCGCACGGTGCCAAAGCTGGTGGCCAAAGCGGCCGGTAATCGCGTTGCTCAGTGTATGAAGATTCTGTCCGCAATGGCATTTGAGGATTACGCTCGTTCAGCGGGTTCTGTCTGCCAGTGTCAGGACTGCGGCGGAAAAGGGCTGATTTACCGCCGGAAAGAGGTGGTGAAGCATCCGGGTATCACCAATATGGAAGGCACTGTGATTGTTGAGCCGGTAGTCCGTAATGAGCGTGTTGGTGAACTGTGCACGACCTGCAACGGGAAGGGGCAGTTAACCCACCGGTGCCGCTGCAAAGGCCGGGGGAAGGTGTACGACGAAGAGCAGAGCGAATTACAGGGTGCGCCGGTATTCAAAGACTGCCCGAAATGCTCGGGGCGCGGGTATAAGCGTGTGCCGTCGTCAGTGGCTTATCAGGCGATAAAGCATCTGGTACCGGAGTTAACACAGCCAACCTGGTCACGGAATTGGAAGCCATTTTATGAGAGCCTATCAGGGAAGTGTTATATTGAGGAATCTCATGCTAATTCAGTTTTTAGCATTGTTACATCCAGAAAATGAATCCAGCTATATGGAAGATGATAAATAATGGAAAGAGATAATAAAAAAAT