Homologs in group_3931

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_3931

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3931

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12895
Feature type CDS
Gene -
Product Cro/Cl family transcriptional regulator
Location 82397 - 82642 (strand: -1)
Length 246 (nucleotides) / 81 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3931
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF15943 Bacterial toxin YdaS

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG4197 Transcription (K) K DNA-binding transcriptional regulator YdaS, prophage-encoded, Cro superfamily

Protein Sequence

MTPNLKSKIVTLANQSEIARRLGIKPQTVNLWFKNGVPAQKVLSLCECLSWKITPHEVAPEIYPNIADGLPDRGELSQLAS

Flanking regions ( +/- flanking 50bp)

ACCAATTTGTAATTGTAAGATTAACTTGTAATCAGGTTAAGGAGACCGATATGACACCAAATCTTAAAAGCAAAATTGTCACACTGGCCAACCAGTCAGAAATTGCCCGCAGGTTGGGAATAAAACCACAAACGGTAAATCTGTGGTTTAAAAACGGAGTGCCGGCACAAAAAGTTTTAAGTCTGTGTGAGTGCCTCAGCTGGAAAATAACTCCCCATGAGGTAGCGCCAGAAATTTATCCGAACATTGCTGATGGCTTACCCGACCGTGGTGAATTATCTCAGCTAGCCAGTTAAAAAACTGATTATTCATAATCAATTTCGCGACAGGAGACGCAAGATGATGA