Homologs in group_2892

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11255 FBDBKF_11255 33.2 Morganella morganii S1 - Replication protein
EHELCC_17960 EHELCC_17960 33.2 Morganella morganii S2 - Replication protein
NLDBIP_05290 NLDBIP_05290 33.2 Morganella morganii S4 - Replication protein
LHKJJB_02170 LHKJJB_02170 33.2 Morganella morganii S3 - Replication protein
HKOGLL_15550 HKOGLL_15550 33.2 Morganella morganii S5 - Replication protein

Distribution of the homologs in the orthogroup group_2892

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2892

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P75978 2.57e-16 81 61 0 55 3 ymfN Protein YmfN Escherichia coli (strain K12)
P76065 7.77e-06 49 33 4 99 4 ydaU Uncharacterized protein YdaU Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12880
Feature type CDS
Gene -
Product Phage terminase, large subunit
Location 80806 - 81588 (strand: -1)
Length 783 (nucleotides) / 260 (amino acids)
In genomic island -

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2892
Orthogroup size 6
N. genomes 5

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Genomic region

Domains

PF13730 Helix-turn-helix domain

Protein Sequence

MIMVRLADFSSDEGISYPSVETLSRQIGAGVSTIRDACSELEKDGWLRKKQRRNGNRNASNLYFLNVDKLETIALQEIAKLKKQRENNAISHPPVSDGSESDRSENSNSGRFDPPDSGVKGGFHPPESGGDPSVNSKHDPSVNSKEDPKPATQKKSTVKFDPLSVRPENVSELVWQDWVKFRKEIKKPLTETSCRQIGKKLAGHPDPDSVLCDSIANGWQGIFPERTTARKPAKPSTHFGFSDKNYESRSAAWVNGGKHV

Flanking regions ( +/- flanking 50bp)

GTTACGTATGGGATGCCTGCGCCGTTTCAGGTGTGAAAGGCACAAAACTGATGATTATGGTTCGCCTGGCTGATTTCTCCAGTGATGAAGGGATCAGCTATCCGAGCGTAGAAACACTGTCCCGGCAGATTGGGGCAGGAGTCAGCACTATCCGCGATGCATGCAGTGAGCTTGAAAAGGATGGCTGGCTGAGGAAAAAACAACGCCGGAACGGTAACCGCAACGCATCGAATTTATATTTTCTCAATGTCGATAAGTTGGAAACTATCGCGTTACAGGAAATCGCAAAGCTGAAAAAACAGCGTGAAAATAACGCAATTTCTCACCCTCCAGTTTCTGACGGTTCAGAATCCGACCGGTCAGAAAACAGTAATTCCGGGCGTTTTGACCCTCCGGATTCTGGCGTTAAAGGGGGTTTTCACCCTCCAGAATCTGGAGGCGATCCATCAGTAAATTCAAAACATGATCCATCAGTAAATTCAAAAGAGGATCCGAAGCCTGCGACGCAGAAAAAATCCACGGTGAAATTTGACCCGTTGTCAGTCCGTCCGGAAAACGTCAGTGAACTTGTCTGGCAGGATTGGGTGAAGTTCCGGAAGGAGATTAAAAAACCACTGACGGAAACCAGCTGCAGGCAGATTGGCAAAAAGCTGGCCGGGCATCCGGATCCTGATTCTGTGCTGTGTGACTCGATTGCCAACGGCTGGCAGGGAATATTCCCGGAACGCACCACAGCGCGGAAACCGGCTAAGCCGAGCACACACTTCGGATTCAGCGATAAAAACTACGAGAGCCGCTCAGCGGCATGGGTGAACGGGGGCAAGCATGTCTGACGAACTGAACGTGAACATTCCACCGCGCTTTGCTGCAGCGACATTTGAGA