Homologs in group_2892

Help

5 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11255 FBDBKF_11255 100.0 Morganella morganii S1 - Replication protein
FBDBKF_12880 FBDBKF_12880 33.2 Morganella morganii S1 - Phage terminase, large subunit
NLDBIP_05290 NLDBIP_05290 100.0 Morganella morganii S4 - Replication protein
LHKJJB_02170 LHKJJB_02170 100.0 Morganella morganii S3 - Replication protein
HKOGLL_15550 HKOGLL_15550 100.0 Morganella morganii S5 - Replication protein

Distribution of the homologs in the orthogroup group_2892

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_2892

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P14815 1.52e-28 114 44 1 125 3 15 Replication protein 15 Enterobacteria phage phi80
P76065 2.93e-18 85 43 2 105 4 ydaU Uncharacterized protein YdaU Escherichia coli (strain K12)
P03688 1.19e-09 61 29 5 148 3 O Replication protein O Escherichia phage lambda
P03687 5.09e-05 47 30 9 180 3 18 DNA replication protein gp18 Salmonella phage P22

  • Number of RefSeq hits:

General

Source Morganella morganii S2
Locus tag EHELCC_17960
Feature type CDS
Gene -
Product Replication protein
Location 34156 - 34995 (strand: -1)
Length 840 (nucleotides) / 279 (amino acids)
In genomic island -

Contig

Accession ZDB_234
Length 41502 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2892
Orthogroup size 6
N. genomes 5

Actions

Genomic region

Domains

PF04492 Bacteriophage replication protein O

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3355 Transcription (K) K Predicted transcriptional regulator

Protein Sequence

MGVVRHADFANKQLSPDKPEVNVASLEDGYFRTATSIGKLKPKLKMSGQEHQVFDAVIMCTFGWNKSEDKVTNTYIADMTDLDDSDVNKALNKLANRRIINLRKSGLFKIISVNKKLDEWVLNRQKTEKVKPPKSSGETTQEVGCFNLSSLVKSPNTKDSLTKDNKDLNTPISPKPEKQAKPEPFDAMGHPLPDWLSRDTWVGWVTYRKDLKKPIKTKQTLNGLISKLTKFYEAGHSPESVIEESISNGWTGLFMPKSPPTRQRIVQPKRVQQFIPEDF

Flanking regions ( +/- flanking 50bp)

GGAGTAATTATACATGAAAGTAATTACGAAACAAAGATATGGAGGTCGCTATGGGAGTTGTTAGGCATGCGGATTTTGCCAACAAACAACTATCGCCGGATAAGCCGGAGGTTAACGTGGCAAGCCTTGAAGACGGATATTTCCGCACCGCAACAAGCATAGGGAAACTGAAGCCAAAACTGAAAATGTCTGGTCAGGAACACCAGGTGTTTGACGCGGTGATCATGTGTACTTTCGGGTGGAATAAATCCGAAGACAAAGTGACAAATACCTATATCGCGGATATGACAGACCTTGATGATTCAGATGTGAACAAAGCACTGAATAAGCTAGCCAACAGACGAATCATAAATTTAAGAAAATCAGGGCTGTTCAAAATTATCAGCGTCAATAAAAAGCTGGATGAATGGGTTCTTAACAGGCAAAAAACAGAGAAAGTTAAACCACCCAAAAGTTCGGGTGAAACCACCCAAGAAGTTGGGTGTTTTAACCTTTCAAGTTTGGTGAAATCACCCAACACCAAAGACAGTCTTACCAAAGACAATAAAGATCTAAATACCCCTATATCCCCTAAACCTGAAAAACAGGCCAAGCCAGAACCGTTTGATGCAATGGGCCATCCTCTTCCTGATTGGCTGAGTCGTGATACCTGGGTAGGTTGGGTTACCTACCGGAAAGACCTGAAAAAACCGATCAAGACAAAACAGACGCTCAACGGGCTGATATCCAAGCTTACTAAATTCTACGAAGCCGGACACTCACCGGAAAGCGTTATCGAAGAGTCAATATCAAATGGCTGGACAGGTCTGTTTATGCCGAAATCACCGCCTACACGGCAACGTATTGTTCAGCCTAAGCGTGTTCAGCAATTCATACCGGAGGACTTCTGATGGCAACAGCAGCGCAGACTCTGGCGCGGTTTAACCGCATGAAGCCGGAG