Homologs in group_2872

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5 homologs were identified in 5 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_11260 FBDBKF_11260 36.6 Morganella morganii S1 dnaC DNA replication protein dnaC
EHELCC_17955 EHELCC_17955 36.6 Morganella morganii S2 dnaC DNA replication protein dnaC
NLDBIP_05285 NLDBIP_05285 36.6 Morganella morganii S4 dnaC DNA replication protein dnaC
LHKJJB_02165 LHKJJB_02165 36.6 Morganella morganii S3 dnaC DNA replication protein dnaC
HKOGLL_15545 HKOGLL_15545 36.6 Morganella morganii S5 dnaC DNA replication protein dnaC

Distribution of the homologs in the orthogroup group_2872

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2872

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q89B30 9.26e-27 105 34 3 181 3 dnaC Replicative helicase loader DnaC Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp)
P0AEF3 3.49e-26 103 35 4 182 3 dnaC Replicative helicase loader DnaC Shigella flexneri
P0AEF0 3.49e-26 103 35 4 182 1 dnaC Replicative helicase loader DnaC Escherichia coli (strain K12)
P0AEF1 3.49e-26 103 35 4 182 3 dnaC Replicative helicase loader DnaC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AEF2 3.49e-26 103 35 4 182 3 dnaC Replicative helicase loader DnaC Escherichia coli O157:H7
P77546 4.5e-26 103 32 4 183 4 ydaV Uncharacterized protein YdaV Escherichia coli (strain K12)
Q8KA79 6.29e-25 100 33 3 181 3 dnaC Replicative helicase loader DnaC Buchnera aphidicola subsp. Schizaphis graminum (strain Sg)
P57134 2.44e-24 98 32 3 181 3 dnaC Replicative helicase loader DnaC Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS)
Q45619 2.36e-13 69 32 5 153 1 None Insertion sequence IS5376 putative ATP-binding protein Geobacillus stearothermophilus
Q50701 1.63e-11 64 30 6 182 3 Rv3427c Putative ATP-binding protein Rv3427c in insertion sequence Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv)
P55380 1.83e-10 61 26 4 184 3 NGR_a00170 Putative insertion sequence ATP-binding protein y4bM/y4kI/y4tA Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P55500 2.27e-10 61 29 6 157 3 NGR_a03160 Putative insertion sequence ATP-binding protein y4iQ/y4nD/y4sD Sinorhizobium fredii (strain NBRC 101917 / NGR234)
P15026 1.32e-09 59 29 6 161 3 istB Insertion sequence IS21 putative ATP-binding protein Pseudomonas aeruginosa
Q99338 2.47e-09 58 29 4 144 3 None Insertion sequence IS232 putative ATP-binding protein Bacillus thuringiensis subsp. berliner
P55923 9.27e-09 56 29 5 147 3 Bmul_4731 Insertion sequence IS408 putative ATP-binding protein Burkholderia multivorans (strain ATCC 17616 / 249)
P55617 6.72e-07 51 26 6 150 3 NGR_a02000 Putative insertion sequence ATP-binding protein y4pL Sinorhizobium fredii (strain NBRC 101917 / NGR234)
Q51762 2.22e-05 47 29 4 106 3 None Insertion sequence IS1162 putative ATP-binding protein Pseudomonas fluorescens
Q2NKC5 0.000105 45 24 8 200 3 dnaA Chromosomal replication initiator protein DnaA Aster yellows witches'-broom phytoplasma (strain AYWB)
P06567 0.00017 44 23 4 155 1 dnaI Replicative helicase loader DnaI Bacillus subtilis (strain 168)
A2BVM7 0.000193 44 28 6 132 3 dnaA Chromosomal replication initiator protein DnaA Prochlorococcus marinus (strain MIT 9515)
Q7NKK4 0.000429 43 32 6 131 3 dnaA Chromosomal replication initiator protein DnaA Gloeobacter violaceus (strain ATCC 29082 / PCC 7421)
P0A3A3 0.000464 43 26 6 131 3 dnaA Chromosomal replication initiator protein DnaA Prochlorococcus marinus subsp. pastoris (strain PCC 9511)
P0A3A2 0.000464 43 26 6 131 3 dnaA Chromosomal replication initiator protein DnaA Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / NIES-2087 / MED4)
Q5R658 0.000481 43 30 3 98 2 VPS4B Vacuolar protein sorting-associated protein 4B Pongo abelii
O75351 0.000508 43 30 3 98 1 VPS4B Vacuolar protein sorting-associated protein 4B Homo sapiens
P46467 0.000596 43 30 3 98 1 Vps4b Vacuolar protein sorting-associated protein 4B Mus musculus
Q0VD48 0.000596 43 30 3 98 2 VPS4B Vacuolar protein sorting-associated protein 4B Bos taurus
Q6YRL3 0.000759 43 23 6 159 3 dnaA Chromosomal replication initiator protein DnaA Onion yellows phytoplasma (strain OY-M)
B9DPX4 0.000778 42 25 5 139 3 dnaA Chromosomal replication initiator protein DnaA Staphylococcus carnosus (strain TM300)
Q793F9 0.000876 42 28 3 98 1 Vps4a Vacuolar protein sorting-associated protein 4A Rattus norvegicus
Q8VEJ9 0.000876 42 28 3 98 1 Vps4a Vacuolar protein sorting-associated protein 4A Mus musculus
Q9UN37 0.000876 42 28 3 98 1 VPS4A Vacuolar protein sorting-associated protein 4A Homo sapiens

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12875
Feature type CDS
Gene dnaC
Product DNA replication protein DnaC
Location 80241 - 80813 (strand: -1)
Length 573 (nucleotides) / 190 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2872
Orthogroup size 6
N. genomes 5

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Genomic region

Domains

PF01695 IstB-like ATP binding protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1484 Replication, recombination and repair (L) L DNA replication protein DnaC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K02315 DNA replication protein DnaC - -

Protein Sequence

MSDELNVNIPPRFAAATFETYHPANPDAESNLKICREYADTWLSRKTAGEGLILCGTPGTGKTHLAVSIARQVATEAKESVFITTAARIIRAFRRTWAGDAEYSELDVLEKYCELGLLIIDEIGVQYGTDSERNILFEVINDRYEYMLPTIMISNLPLNELAPLLGERVVDRMLEGGAVLSFNWPSYRSN

Flanking regions ( +/- flanking 50bp)

CGATAAAAACTACGAGAGCCGCTCAGCGGCATGGGTGAACGGGGGCAAGCATGTCTGACGAACTGAACGTGAACATTCCACCGCGCTTTGCTGCAGCGACATTTGAGACGTATCACCCGGCGAATCCGGATGCGGAAAGCAATCTGAAAATCTGCCGCGAGTATGCCGATACATGGCTATCCCGAAAAACCGCCGGAGAGGGACTTATTTTGTGCGGAACACCAGGAACCGGGAAAACACACCTCGCAGTATCAATCGCCCGTCAGGTTGCCACTGAGGCGAAGGAATCGGTATTTATCACCACAGCGGCGCGTATCATCCGGGCTTTTCGCCGTACATGGGCTGGCGATGCAGAATACAGCGAGCTCGACGTATTGGAAAAATACTGCGAGCTGGGTCTGCTAATTATCGACGAAATCGGGGTGCAGTACGGAACTGACTCAGAGCGCAATATTTTGTTTGAAGTGATTAACGACCGGTACGAGTACATGCTGCCGACTATCATGATCAGCAACCTGCCGCTGAACGAACTGGCCCCGCTGCTGGGTGAACGCGTTGTTGACCGCATGCTGGAAGGTGGGGCAGTGCTGTCGTTCAACTGGCCAAGCTACCGGAGTAATTGATTATGTTCAGTGAGCAGGAATTAGAAGCCGCTGTCATTGGTGGTTTACTG