COG1484


Help to interpret the results

Three outputs have been generated:
General: this result contains the description and frequency of the selected COG entries COG1484, of which KO pathways and KO modules it is part. Additionally, its occurence in the database is reported.
Proteins list: list of occurences of the COG entries within the database. 11 occurences are identified. The table reports the orthogroup, the organism in which each occurrence has been found, and the locus tag enriched by start and stop position, strand, gene name and product.
Clicking on the Ortohgroup name or locus you will be redirected to further info.
Profiles: Phylogenetic tree annotated with
- the presence of the COG entry(ies) of interest within all the genomes of the database (first column)
- the size of the orthogroup(s) in which the reported COG entries has been clustered.
In red the COG entries with positive hit(s) in the corresponding genome.
In green the discrepencies between orthogroup clustering and COG entries prediction. Green homologs (same orthogroup) are not positive hit(s) for the considered COG entries.

Variations within orthogroups may be due to the clustering of multi domain proteins or because of erroneous homolog clustering or COG entries prediction.

Description

Description DNA replication protein DnaC
Function(s) descr. Replication, recombination and repair (L)

Occurence in the database

COG1484 is associated with 11 different proteins (see tab "Protein list" and "Profile")
The 11 proteins are classified into 2 different orthogroup(s)
# Orthogroup Locus Start Stop S. Gene Product Organism
0 group_2872 FBDBKF_11260 66559 67287 1 dnaC DNA replication protein dnaC Morganella morganii S1
1 group_2872 FBDBKF_12875 80241 80813 -1 dnaC DNA replication protein DnaC Morganella morganii S1
2 group_3616 FBDBKF_20270 195 980 -1 istB IS21-like element IS1326 family helper ATPase IstB Morganella morganii S1
3 group_2872 EHELCC_17955 33428 34156 -1 dnaC DNA replication protein dnaC Morganella morganii S2
4 group_3616 EHELCC_19100 16180 16965 1 istB IS21-like element IS1326 family helper ATPase IstB Morganella morganii S2
5 group_2872 NLDBIP_05285 33254 33982 -1 dnaC DNA replication protein dnaC Morganella morganii S4
6 group_3616 NLDBIP_19575 9463 10248 1 istB IS21-like element IS1326 family helper ATPase IstB Morganella morganii S4
7 group_2872 LHKJJB_02165 10778 11506 -1 dnaC DNA replication protein dnaC Morganella morganii S3
8 group_3616 LHKJJB_19490 195 980 -1 istB IS21-like element IS1326 family helper ATPase IstB Morganella morganii S3
9 group_2872 HKOGLL_15545 34218 34946 -1 dnaC DNA replication protein dnaC Morganella morganii S5
10 group_3616 HKOGLL_19455 9463 10248 1 istB IS21-like element IS1326 family helper ATPase IstB Morganella morganii S5