Homologs in group_3755

Help

1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS07855 F4V73_RS07855 64.2 Morganella psychrotolerans csy3 type I-F CRISPR-associated protein Csy3

Distribution of the homologs in the orthogroup group_3755

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_3755

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6D0W6 2.65e-62 202 43 5 250 1 csy3 CRISPR-associated protein Csy3 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)
Q02MM1 4e-61 199 42 6 260 1 csy3 CRISPR-associated protein Csy3 Pseudomonas aeruginosa (strain UCBPP-PA14)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12620
Feature type CDS
Gene -
Product Type I-F CRISPR-associated protein Csy3
Location 39559 - 40341 (strand: -1)
Length 783 (nucleotides) / 260 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3755
Orthogroup size 2
N. genomes 2

Actions

Genomic region

Domains

PF09615 CRISPR-associated protein (Cas_Csy3)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5936 Defense mechanisms (V) V CRISPR-Cas system type I-F effector complex subunit Cas7f/Csy3, RAMP superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19129 CRISPR-associated protein Csy3 - -

Protein Sequence

MLEAEQNVIIFSFSLKITGGLKYPAACNNEIFRQRYQAVITDYLEREHCREPARRYAHNIACGRFLWRNLVGAEHIEVVVDNLSAEKKQQWIFDARKYSLRHFEQTDNIAGDLGRHIAAALSCDDGALLLAVSARVITGKGQEIYPSCEFVMNKRKGGSSRILCHIDGTAGMHSQKIGNALRSVDTWYPAFSDLTAGVGVIAADPYGAVTHLGAVFRPPGSGQDFYTLFEKWVSGKKLAEHEENYVVAVLIRGGVFGGGG

Flanking regions ( +/- flanking 50bp)

TATCCGGACAGAACATTAATGATCCCAATATTCAGTCTATGGATTACTGCATGCTGGAAGCTGAACAAAATGTAATCATATTTAGCTTCTCACTGAAAATTACCGGTGGGCTGAAATATCCTGCTGCCTGTAATAATGAAATATTCCGTCAGCGCTATCAGGCGGTAATAACGGATTATCTGGAAAGAGAGCATTGCCGTGAGCCTGCGCGGCGATATGCACATAATATTGCCTGCGGACGTTTTTTGTGGCGGAACCTGGTTGGCGCAGAGCATATTGAGGTGGTTGTGGATAATCTCAGTGCGGAAAAAAAACAGCAGTGGATATTTGATGCACGAAAGTACAGCCTTCGTCATTTTGAGCAGACGGATAATATAGCCGGCGACCTGGGGAGACATATTGCCGCAGCACTGAGTTGTGATGATGGTGCATTATTACTGGCTGTTTCAGCCAGAGTGATAACCGGAAAAGGGCAGGAAATTTATCCCAGTTGTGAATTTGTGATGAATAAAAGAAAGGGGGGGAGCAGCCGGATACTCTGCCATATTGACGGCACTGCAGGGATGCATTCACAAAAAATCGGCAATGCTTTGCGTTCAGTGGATACCTGGTATCCGGCCTTTTCTGATTTAACCGCAGGGGTGGGCGTTATCGCGGCCGATCCCTATGGGGCGGTCACGCATCTGGGGGCAGTATTTCGTCCGCCGGGGTCAGGGCAGGATTTTTATACACTCTTTGAAAAATGGGTCAGCGGAAAAAAACTCGCTGAACATGAAGAAAATTATGTCGTGGCAGTGTTAATTCGCGGCGGTGTTTTCGGTGGCGGAGGGTAAGCGGATGCGATTTTATCAGACAATCACGATTTTGCCGGATGCACTGATAT