Homologs in group_3755

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_12620 FBDBKF_12620 64.2 Morganella morganii S1 - Type I-F CRISPR-associated protein Csy3

Distribution of the homologs in the orthogroup group_3755

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3755

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q02MM1 2.75e-93 284 46 10 345 1 csy3 CRISPR-associated protein Csy3 Pseudomonas aeruginosa (strain UCBPP-PA14)
Q6D0W6 3.74e-90 276 45 5 333 1 csy3 CRISPR-associated protein Csy3 Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS07855
Feature type CDS
Gene csy3
Product type I-F CRISPR-associated protein Csy3
Location 1642195 - 1643217 (strand: -1)
Length 1023 (nucleotides) / 340 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3755
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF09615 CRISPR-associated protein (Cas_Csy3)

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG5936 Defense mechanisms (V) V CRISPR-Cas system type I-F effector complex subunit Cas7f/Csy3, RAMP superfamily

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K19129 CRISPR-associated protein Csy3 - -

Protein Sequence

MDEHRDVVSVLSFEKKLVPSDGVFYGTNWQEESPVIPLKLQEKSIRGTLSFRQKKRSESQLPEAGGYMGKPNLQTVDTCALGPELDSLLFRFTLKVIGGLQYPSACNNAAFRQRYEKVAADYLAREKCREQGHRYALNIANARFLWRNRVGAEHIEVVVNILNKGREQQWLFDACRYSIRDFDQRDADISTLGEKIAQALSGNKGALLLEISARVQLGRGQTVYPSGELILNKGKGTKSKVLYHIDGTAAMHSQKIGNALRSVDTWYPAYSDPLNSAGAIAVELFGAVTHLGMVFRPPGSGQDFYTLFYKWVYGELLQENEEHYVVAVLIRGGVFGEGDK

Flanking regions ( +/- flanking 50bp)

TATTTGTGTCAGCAGGTTCGTTCTTATTTTCCGGGCCGGGGAGAACATTGATGGATGAACACAGGGATGTGGTGTCTGTTTTATCATTTGAGAAAAAATTAGTGCCATCTGATGGTGTTTTTTATGGCACAAATTGGCAGGAGGAGAGTCCGGTTATTCCGCTGAAATTACAGGAAAAATCAATTCGGGGAACCTTGTCGTTCCGGCAGAAAAAAAGGTCAGAAAGTCAGTTGCCGGAGGCTGGCGGGTATATGGGCAAACCCAACTTACAAACAGTGGATACCTGTGCGCTGGGACCGGAGCTGGACTCTCTGTTGTTTCGTTTTACTCTGAAGGTGATTGGCGGGCTTCAGTACCCCTCGGCGTGTAACAATGCTGCATTCAGGCAGCGTTATGAAAAAGTGGCAGCGGACTATCTGGCACGGGAAAAATGCAGGGAGCAGGGGCATCGCTATGCACTCAATATTGCGAATGCCCGCTTTCTTTGGCGTAACCGGGTGGGTGCTGAACATATTGAGGTGGTGGTTAATATCCTTAATAAAGGGCGGGAGCAGCAGTGGCTTTTTGACGCATGCAGATACAGTATCCGTGATTTTGACCAACGGGATGCTGATATCAGTACTCTGGGTGAAAAAATAGCACAAGCACTCAGCGGTAATAAAGGTGCGTTATTACTTGAAATTTCAGCCCGTGTTCAGTTGGGAAGAGGGCAGACGGTGTATCCGAGTGGTGAACTGATACTGAATAAAGGAAAAGGCACTAAAAGTAAGGTGCTTTATCATATTGACGGAACAGCGGCGATGCATTCACAGAAAATTGGTAATGCATTGCGTTCTGTCGATACCTGGTATCCTGCGTATTCTGATCCGCTTAACAGTGCCGGAGCGATTGCAGTTGAGCTGTTTGGTGCGGTGACTCACCTGGGGATGGTCTTTCGCCCGCCCGGCTCCGGACAGGATTTTTATACCCTTTTTTATAAGTGGGTGTACGGGGAATTATTACAGGAAAATGAGGAGCACTATGTCGTCGCGGTATTGATCCGCGGAGGGGTATTTGGTGAGGGGGATAAATAAAACAGCATATGAATTATTATCAGACTATCACTATATTATCTGAGGCGACT