Homologs in group_3702

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2 homologs were identified in 2 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
F4V73_RS07780 F4V73_RS07780 89.5 Morganella psychrotolerans ydeE efflux MFS transporter YdeE
PMI_RS06040 PMI_RS06040 61.2 Proteus mirabilis HI4320 ydeE efflux MFS transporter YdeE

Distribution of the homologs in the orthogroup group_3702

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3702

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P31126 2.89e-165 471 61 0 365 3 ydeE Uncharacterized MFS-type transporter YdeE Escherichia coli (strain K12)
P54559 2.06e-17 86 27 10 352 3 yqjV Uncharacterized MFS-type transporter YqjV Bacillus subtilis (strain 168)
A0A1C7E424 1.11e-16 84 24 7 368 1 mdrP Na(+), Li(+), K(+)/H(+) antiporter Planococcus maritimus
O07569 7.63e-06 51 21 2 145 3 yhjO Uncharacterized MFS-type transporter YhjO Bacillus subtilis (strain 168)
Q88K63 2.56e-05 49 26 0 119 3 sotB Probable sugar efflux transporter Pseudomonas putida (strain ATCC 47054 / DSM 6125 / CFBP 8728 / NCIMB 11950 / KT2440)
B0KLJ7 3.3e-05 49 26 0 119 3 sotB Probable sugar efflux transporter Pseudomonas putida (strain GB-1)
Q6GIU7 6.45e-05 48 22 5 205 3 norA Quinolone resistance protein NorA Staphylococcus aureus (strain MRSA252)
Q6GBD5 8.05e-05 48 22 5 205 3 norA Quinolone resistance protein NorA Staphylococcus aureus (strain MSSA476)
P0A0J6 8.48e-05 48 22 5 205 3 norA Quinolone resistance protein NorA Staphylococcus aureus (strain MW2)
P0A0J7 8.48e-05 48 22 5 205 1 norA Quinolone resistance protein NorA Staphylococcus aureus
P0A0J5 8.48e-05 48 22 5 205 3 norA Quinolone resistance protein NorA Staphylococcus aureus (strain N315)
P0A0J4 8.48e-05 48 22 5 205 3 norA Quinolone resistance protein NorA Staphylococcus aureus (strain Mu50 / ATCC 700699)
Q5HHX4 9.11e-05 47 22 5 205 3 norA Quinolone resistance protein NorA Staphylococcus aureus (strain COL)
Q1IB51 0.000185 47 25 0 119 3 sotB Probable sugar efflux transporter Pseudomonas entomophila (strain L48)
A8AGR7 0.000405 45 24 0 119 3 sotB Probable sugar efflux transporter Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12545
Feature type CDS
Gene ydeE
Product efflux MFS transporter YdeE
Location 23525 - 24706 (strand: 1)
Length 1182 (nucleotides) / 393 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3702
Orthogroup size 3
N. genomes 3

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Genomic region

Domains

PF07690 Major Facilitator Superfamily

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2814 Carbohydrate transport and metabolism (G) G Predicted arabinose efflux permease AraJ, MFS family

Protein Sequence

MQAATRSTIALLASSFLITIGRGATIPFMAIYLSRQYDMAVDQVGVALTVALTTGVLFSLGFGIIADKFDKKRYMLMAILVYIAGFIAIPLTHNIALVVVFFSLINCAYSVFATVLKAYFADTLPPARKTKVFSLNYTFVNMGWTVGPPIGTGLLMYSADLPFWLAACTASFPIFFIQRFVRSVPPSASGSNSTAWQPSVMLHDKALLWFTLSAFLGSLVFGSFSACISQYVLTVADTTLAEKVIGVVLPVNAAVVVSLQYMIGRRISTDNLQKLMTLGTLFFMAGLAGFMMSGSNLVFWGIAAFVFTLGELIYAPGEYMLIDNIAPDGMKSSYFSAQSLGWLGGAFNPLMTGGVLTYFPPNTLWLLLIGVSACAWLCMMRGLKISRNRLIHQ

Flanking regions ( +/- flanking 50bp)

TTGATTACGTGAATATTAAAAAATAAAATAAAAACACTGAGAATGTCACCATGCAAGCCGCCACCCGTTCCACCATTGCACTGCTCGCTTCCTCATTCTTAATTACTATCGGACGGGGTGCCACTATCCCGTTTATGGCGATTTATCTCAGCCGTCAGTATGACATGGCGGTGGATCAGGTCGGGGTGGCACTGACGGTCGCACTGACAACCGGCGTGTTATTCAGTCTCGGTTTTGGCATTATTGCGGACAAATTTGATAAAAAGCGCTATATGCTGATGGCAATTCTGGTTTATATCGCCGGATTTATCGCCATACCGCTGACTCATAATATCGCGCTCGTCGTTGTCTTCTTTTCACTCATTAACTGCGCCTACTCCGTTTTTGCTACGGTGCTGAAAGCCTATTTCGCCGATACACTGCCACCGGCGCGCAAAACCAAAGTCTTTTCCCTGAACTATACCTTCGTCAATATGGGCTGGACTGTCGGGCCGCCGATTGGTACCGGCCTGCTGATGTACAGCGCGGATCTGCCGTTCTGGCTGGCGGCCTGCACCGCCTCATTCCCGATATTCTTTATTCAGCGTTTTGTCCGCAGCGTGCCGCCTTCTGCCTCCGGCAGCAACAGTACCGCCTGGCAGCCTTCTGTCATGCTGCATGATAAAGCCCTGCTCTGGTTCACATTATCCGCCTTTCTGGGATCGCTGGTGTTTGGTTCGTTTTCCGCCTGTATTTCCCAGTATGTCCTGACGGTGGCAGATACCACGCTGGCAGAAAAAGTGATTGGTGTGGTACTGCCGGTCAATGCCGCAGTAGTAGTTTCACTGCAATATATGATCGGCCGCCGGATAAGCACAGACAATCTGCAAAAGCTGATGACACTCGGTACACTCTTTTTTATGGCCGGACTGGCCGGATTTATGATGTCAGGCAGCAACCTTGTGTTCTGGGGAATTGCTGCATTTGTCTTTACCCTCGGTGAACTGATTTATGCGCCGGGTGAATATATGCTGATCGACAACATTGCGCCGGACGGCATGAAATCCAGCTACTTTTCCGCTCAATCCCTCGGCTGGCTCGGCGGTGCCTTTAACCCGCTGATGACCGGCGGTGTGCTGACCTATTTCCCGCCAAATACCCTGTGGCTGCTGCTGATTGGTGTTTCCGCCTGCGCCTGGCTGTGTATGATGCGCGGCCTGAAGATCAGCAGAAACAGGCTCATTCATCAGTGAATATTTGATTCACTTATCATTAATTAATAATACTTCATATTCCGATACGG