Homologs in group_3742

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1 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
PMI_RS04785 PMI_RS04785 76.0 Proteus mirabilis HI4320 - ParB/RepB/Spo0J family partition protein

Distribution of the homologs in the orthogroup group_3742

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3742

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P77174 3.49e-78 236 56 3 193 1 ybdM Uncharacterized protein YbdM Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_12490
Feature type CDS
Gene spo0J
Product Chromosome segregation protein Spo0J, contains ParB-like nuclease domain
Location 16717 - 17346 (strand: 1)
Length 630 (nucleotides) / 209 (amino acids)

Contig

Accession contig_15
Length 114235 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3742
Orthogroup size 2
N. genomes 2

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Genomic region

Domains

PF02195 ParB/Sulfiredoxin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1475 Cell cycle control, cell division, chromosome partitioning (D) D Chromosome segregation protein Spo0J, contains ParB-like nuclease domain

Protein Sequence

MKTVLSLLENYLNGLDNEEQTIEALNRIKLFLHQRSPFKDEPVDCVLWVKRAQVTANDYNPNVMSPSEKKLLETSLTKDGYTQPVVVLPSPHDRSDLQVVDGYHRYLLSRKNALKKRLNGYLPVTLLDTENHGVAEQMAVTIRHNRARGQHQVTAMSDIVRDLSRLGWSDERIGEELGMSPDEVLRLKQISGLAELFSEREFSEAWTVK

Flanking regions ( +/- flanking 50bp)

AGGCAAAACGCAAAGACTGGCAACTGATATAGCAGACGGATAACATAAATATGAAAACAGTACTCTCTTTACTGGAAAACTATCTGAACGGACTGGATAATGAAGAACAAACAATTGAGGCACTCAACCGGATAAAACTTTTTTTACATCAGCGCAGTCCGTTTAAAGATGAACCGGTCGATTGTGTGCTGTGGGTAAAGCGGGCACAGGTGACCGCAAATGATTATAATCCGAACGTGATGTCACCCTCGGAGAAAAAATTGCTGGAAACGTCTCTGACCAAAGACGGTTATACCCAGCCGGTTGTTGTGCTGCCATCTCCGCACGACCGCTCAGACTTGCAGGTGGTTGATGGCTATCATCGTTATTTATTAAGCCGGAAAAATGCACTGAAAAAACGACTTAACGGATACCTGCCGGTAACGCTGCTCGATACGGAAAATCACGGAGTTGCTGAACAGATGGCCGTTACTATCCGCCATAACCGGGCCCGCGGACAGCATCAGGTTACCGCGATGTCAGATATTGTCCGGGACTTATCACGACTGGGCTGGAGCGATGAAAGAATCGGAGAGGAACTGGGAATGTCGCCGGATGAAGTATTACGGCTTAAGCAAATCAGCGGTCTGGCTGAACTATTTTCTGAGCGGGAATTTTCTGAAGCCTGGACAGTAAAATAAATCATTCCGCTGTTATCCGGTCCGGATGCGGTTTACCGGGATATCTGCGG