Homologs in group_3312

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4 homologs were identified in 4 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_15135 EHELCC_15135 100.0 Morganella morganii S2 fimA Pilin (type 1 fimbrial protein)
NLDBIP_14965 NLDBIP_14965 100.0 Morganella morganii S4 fimA Pilin (type 1 fimbrial protein)
LHKJJB_14380 LHKJJB_14380 100.0 Morganella morganii S3 fimA Pilin (type 1 fimbrial protein)
HKOGLL_13000 HKOGLL_13000 100.0 Morganella morganii S5 fimA Pilin (type 1 fimbrial protein)

Distribution of the homologs in the orthogroup group_3312

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_3312

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P12267 1.49e-06 50 34 3 91 3 mrkA Fimbrial subunit type 3 Klebsiella pneumoniae

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_10800
Feature type CDS
Gene fimA
Product Pilin (type 1 fimbrial protein)
Location 128481 - 129068 (strand: -1)
Length 588 (nucleotides) / 195 (amino acids)

Contig

Accession contig_12
Length 141735 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_3312
Orthogroup size 5
N. genomes 5

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Genomic region

Domains

PF00419 Fimbrial protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3539 Cell motility (N) N Pilin (type 1 fimbrial protein)

Protein Sequence

MLKKTLITALVSAAFFSGSASAVTAAGGIINITGAISDTTCTINGGNSADFAVLLDPITVTDAGVTANTVITKNQKAFTMTFSDCAPASVPPGSNLKIHFASPNNISSTGNYLINDTVNEGDPSVAKNVGFSLSSTTAPSVALSLNAAYDTGVKGDKTAPASDQVTLIASYYKTNTSPAKVGPVHSNVIYTVSYL

Flanking regions ( +/- flanking 50bp)

TAGCCTCTTATTTTTGTCAGTCTGGTATCTTATTTTTACCGGAGTTAACCATGTTAAAGAAAACGCTTATTACGGCATTAGTTTCTGCCGCCTTTTTTTCAGGCTCAGCGTCTGCGGTCACTGCTGCAGGCGGGATTATAAACATCACAGGTGCTATCAGTGACACCACCTGTACTATTAACGGAGGCAACAGCGCCGACTTCGCCGTATTATTAGATCCGATTACAGTAACGGATGCCGGGGTAACCGCAAATACCGTCATTACCAAAAATCAGAAAGCATTTACCATGACATTCTCTGATTGTGCACCTGCTTCAGTCCCGCCCGGAAGTAACCTGAAAATACATTTCGCGTCCCCCAACAATATATCGTCAACCGGAAACTACCTGATTAACGATACCGTTAATGAAGGGGATCCGTCTGTCGCGAAAAATGTCGGGTTCAGTTTATCGTCAACAACCGCACCGTCAGTGGCACTTTCACTGAATGCGGCGTATGACACCGGAGTGAAGGGAGATAAAACCGCACCAGCATCGGATCAGGTGACATTAATTGCCAGTTATTACAAAACCAATACCTCTCCTGCAAAAGTCGGGCCTGTACATTCCAACGTGATTTATACAGTCTCTTATTTATAACCATTGTCAGACAGTCAGGCTTGTCAAAAAGCCTGACTGTTTACAGGGGA