Homologs in group_15

Help

18 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_02695 FBDBKF_02695 65.8 Morganella morganii S1 sdaC Amino acid permease
FBDBKF_08400 FBDBKF_08400 45.5 Morganella morganii S1 sdaC Amino acid permease
EHELCC_03165 EHELCC_03165 65.8 Morganella morganii S2 sdaC Amino acid permease
EHELCC_13125 EHELCC_13125 45.5 Morganella morganii S2 sdaC Amino acid permease
EHELCC_14955 EHELCC_14955 100.0 Morganella morganii S2 sdaC Amino acid permease
NLDBIP_00295 NLDBIP_00295 65.8 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_13465 NLDBIP_13465 45.5 Morganella morganii S4 sdaC Amino acid permease
NLDBIP_14785 NLDBIP_14785 100.0 Morganella morganii S4 sdaC Amino acid permease
LHKJJB_01740 LHKJJB_01740 65.8 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_13090 LHKJJB_13090 45.5 Morganella morganii S3 sdaC Amino acid permease
LHKJJB_14560 LHKJJB_14560 100.0 Morganella morganii S3 sdaC Amino acid permease
HKOGLL_01780 HKOGLL_01780 65.8 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_11940 HKOGLL_11940 45.5 Morganella morganii S5 sdaC Amino acid permease
HKOGLL_13180 HKOGLL_13180 100.0 Morganella morganii S5 sdaC Amino acid permease
F4V73_RS05190 F4V73_RS05190 65.8 Morganella psychrotolerans - amino acid permease
F4V73_RS09600 F4V73_RS09600 46.5 Morganella psychrotolerans - amino acid permease
F4V73_RS14330 F4V73_RS14330 97.0 Morganella psychrotolerans - aromatic amino acid transport family protein
PMI_RS13530 PMI_RS13530 45.1 Proteus mirabilis HI4320 - amino acid permease

Distribution of the homologs in the orthogroup group_15

Help

Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

Download SVG

Phylogeny of the RefSeq best hits of group_15

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P37660 0.0 566 68 0 405 1 yhjV Inner membrane transport protein YhjV Escherichia coli (strain K12)
Q8XAF5 3.34e-135 398 47 3 414 1 dlsT Serine transporter Escherichia coli O157:H7
P42628 1.48e-134 396 47 3 414 1 dlsT Probable serine transporter Escherichia coli (strain K12)
P44615 4.78e-30 123 24 9 404 3 sdaC Serine transporter SdaC Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P0AAD6 2.52e-26 113 25 8 412 1 sdaC Serine transporter SdaC Escherichia coli (strain K12)
P0AAD7 2.52e-26 113 25 8 412 3 sdaC Serine transporter SdaC Escherichia coli O157:H7
Q83QD0 4.66e-23 103 24 8 412 3 sdaC Serine transporter SdaC Shigella flexneri
B7LQI2 4.13e-22 101 25 14 430 3 tdcC Threonine/serine transporter TdcC Escherichia fergusonii (strain ATCC 35469 / DSM 13698 / CCUG 18766 / IAM 14443 / JCM 21226 / LMG 7866 / NBRC 102419 / NCTC 12128 / CDC 0568-73)
A6TAU9 2.29e-20 96 23 12 428 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578)
B5XVZ7 2.29e-20 96 23 12 428 3 tdcC Threonine/serine transporter TdcC Klebsiella pneumoniae (strain 342)
A1JIM8 2.74e-20 95 24 11 408 3 tdcC Threonine/serine transporter TdcC Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081)
Q4G4A7 3.21e-20 95 26 14 430 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda
D0ZE09 3.79e-20 95 26 14 430 3 tdcC Threonine/serine transporter TdcC Edwardsiella tarda (strain EIB202)
B4T6B2 9.29e-20 94 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella newport (strain SL254)
A9N628 1.64e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi B (strain ATCC BAA-1250 / SPB7)
Q8ZLW1 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
B4TVX7 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella schwarzengrund (strain CVM19633)
B5BGF7 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain AKU_12601)
C0PZ16 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi C (strain RKS4594)
Q5PCA8 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella paratyphi A (strain ATCC 9150 / SARB42)
B4TIX1 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella heidelberg (strain SL476)
B5REJ9 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella gallinarum (strain 287/91 / NCTC 13346)
B5QZS1 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella enteritidis PT4 (strain P125109)
B5FHX7 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella dublin (strain CT_02021853)
Q57JL7 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella choleraesuis (strain SC-B67)
B5F6Q0 1.75e-19 93 25 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella agona (strain SL483)
A9MPR1 2.4e-19 93 24 12 409 3 tdcC Threonine/serine transporter TdcC Salmonella arizonae (strain ATCC BAA-731 / CDC346-86 / RSK2980)
A8AQ08 4.43e-19 92 25 13 409 3 tdcC Threonine/serine transporter TdcC Citrobacter koseri (strain ATCC BAA-895 / CDC 4225-83 / SGSC4696)
Q32BK1 1.1e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Shigella dysenteriae serotype 1 (strain Sd197)
Q3YXB3 1.22e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Shigella sonnei (strain Ss046)
P0AAD8 1.22e-17 88 24 13 409 1 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12)
A8A4S9 1.22e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O9:H4 (strain HS)
B1XGT1 1.22e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / DH10B)
C4ZR30 1.22e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain K12 / MC4100 / BW2952)
B7NJY3 1.22e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O7:K1 (strain IAI39 / ExPEC)
B5YS06 1.22e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7 (strain EC4115 / EHEC)
P0AAD9 1.22e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O157:H7
A7ZS06 1.22e-17 88 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O139:H28 (strain E24377A / ETEC)
Q83Q28 1.63e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Shigella flexneri
Q0T0F2 1.63e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Shigella flexneri serotype 5b (strain 8401)
B1LFL8 1.63e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SMS-3-5 / SECEC)
B7NDA4 1.63e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC)
B1IRJ9 1.63e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain ATCC 8739 / DSM 1576 / NBRC 3972 / NCIMB 8545 / WDCM 00012 / Crooks)
Q31WR5 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 4 (strain Sb227)
B2U0A0 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Shigella boydii serotype 18 (strain CDC 3083-94 / BS512)
Q1R6L7 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain UTI89 / UPEC)
B6I491 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain SE11)
Q8FDC3 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
Q0TCY8 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O6:K15:H31 (strain 536 / UPEC)
A1AG28 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O1:K1 / APEC
B7M023 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O8 (strain IAI1)
B7N0B7 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O81 (strain ED1a)
B7LH53 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli (strain 55989 / EAEC)
B7UJ20 1.83e-17 87 24 13 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O127:H6 (strain E2348/69 / EPEC)
A4WEU1 1.95e-17 87 24 10 408 3 tdcC Threonine/serine transporter TdcC Enterobacter sp. (strain 638)
B7MB46 1.97e-17 87 24 14 409 3 tdcC Threonine/serine transporter TdcC Escherichia coli O45:K1 (strain S88 / ExPEC)
P63340 3.57e-15 80 22 8 406 1 yqeG Inner membrane transport protein YqeG Escherichia coli (strain K12)
P63341 3.57e-15 80 22 8 406 3 yqeG Inner membrane transport protein YqeG Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P63342 3.57e-15 80 22 8 406 3 yqeG Inner membrane transport protein YqeG Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_10620
Feature type CDS
Gene sdaC
Product Amino acid permease
Location 85877 - 87160 (strand: -1)
Length 1284 (nucleotides) / 427 (amino acids)

Contig

Accession contig_12
Length 141735 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_15
Orthogroup size 19
N. genomes 7

Actions

Genomic region

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0814 Amino acid transport and metabolism (E) E Amino acid permease

Protein Sequence

MADMTSTENSAKALGKIPFTMYDAGWVVLCIGMAIGAGTVVMPIQIGLKGIWVFILAFMIAYPATYMLQKLYMNTLSESEECEDYTNIITQYLGSNWGVALGVIYFLMLIHGIFIYSLSVIFDSASYLHTFGVTEGVLSSSLIYRVAVFAALIFIASKGEKLLFKISGPMVIVKVGIIVSLGLVMIPHWDFNNITAFPPIGDFTRDVLLTVPFAFFSAVFVQILNPMNIAYRKLESDKRVATYRAIRAHRVAYITLVTIILFFSFSFTFSISHEQAVSAFEQNISALAIAAQVIPGAVVSVMTTVLNIFAVLTAFFGIYLGFQESVKGLAVNILSRFMDKEKINHTVLNICISVFIVALLTAWVSTGFSVVVFFQIGSPLYAIVSCLIPVYLVFRVAKLKKFKDWKAWCVMGFGILLLIAPFFKYLE

Flanking regions ( +/- flanking 50bp)

TTAGAAACCATAATCACAATAAATTATTATGAAAACCAAGGGGGCTTAGTATGGCGGACATGACCTCAACCGAGAATTCCGCGAAAGCGCTGGGCAAAATACCATTTACAATGTATGACGCCGGCTGGGTAGTACTTTGTATTGGTATGGCGATCGGTGCCGGTACCGTTGTAATGCCGATTCAGATCGGTCTGAAAGGTATTTGGGTATTTATTTTAGCTTTCATGATTGCGTATCCGGCAACCTATATGTTGCAGAAGCTGTACATGAATACGCTGTCTGAAAGTGAAGAATGTGAAGACTACACAAACATAATCACACAGTATCTGGGCAGTAACTGGGGTGTGGCGCTGGGGGTTATTTACTTCCTGATGCTTATCCACGGTATCTTTATTTACTCTCTCTCTGTTATTTTCGACAGTGCCTCTTATCTCCATACGTTTGGTGTTACAGAGGGTGTGCTTTCAAGCTCACTGATCTATCGTGTGGCTGTCTTTGCCGCGCTGATTTTCATTGCCTCCAAGGGCGAGAAACTGCTGTTTAAAATCTCCGGTCCGATGGTTATCGTCAAAGTCGGTATCATTGTATCGCTGGGTCTGGTGATGATCCCTCACTGGGATTTCAATAACATCACTGCATTCCCGCCGATTGGTGACTTTACCCGTGACGTGCTGCTGACTGTACCGTTTGCGTTCTTCTCTGCGGTCTTCGTTCAGATTCTGAACCCGATGAACATCGCGTACCGTAAACTGGAATCAGACAAACGTGTTGCCACCTACCGTGCTATCCGCGCTCACCGCGTGGCCTATATCACCCTGGTGACAATCATCCTGTTCTTCTCATTCTCCTTTACGTTCTCTATCAGTCATGAGCAGGCCGTATCCGCGTTTGAACAGAACATCTCTGCACTGGCTATTGCGGCTCAGGTTATCCCGGGTGCGGTCGTGAGTGTGATGACCACCGTTCTGAACATCTTTGCAGTTCTGACAGCATTCTTCGGTATCTATCTGGGCTTCCAGGAATCAGTGAAAGGCCTTGCGGTTAACATCCTTTCCCGCTTCATGGATAAAGAGAAAATCAACCACACCGTATTAAACATCTGTATCTCTGTCTTCATCGTTGCATTACTGACTGCATGGGTGTCAACAGGGTTCTCCGTGGTTGTCTTCTTCCAGATTGGTAGTCCGTTATACGCTATCGTTTCCTGCTTAATTCCTGTTTACCTGGTATTCCGTGTCGCGAAACTGAAAAAATTCAAAGACTGGAAAGCCTGGTGTGTTATGGGCTTCGGTATCCTGCTGCTCATCGCACCGTTCTTCAAATACCTTGAGTGACGGGTAAGAGAAAACAGGCCATCCGTCGGTGCCCCGCACTGACTGAAATA