Homologs in group_1143

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_09590 EHELCC_09590 100.0 Morganella morganii S2 creA protein CreA
NLDBIP_09970 NLDBIP_09970 100.0 Morganella morganii S4 creA protein CreA
LHKJJB_07785 LHKJJB_07785 100.0 Morganella morganii S3 creA protein CreA
HKOGLL_07335 HKOGLL_07335 100.0 Morganella morganii S5 creA protein CreA
F4V73_RS15390 F4V73_RS15390 92.0 Morganella psychrotolerans creA protein CreA
PMI_RS18500 PMI_RS18500 73.9 Proteus mirabilis HI4320 creA protein CreA

Distribution of the homologs in the orthogroup group_1143

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1143

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P0AE94 1.29e-81 241 78 1 141 3 creA Protein CreA Shigella flexneri
P0AE91 1.29e-81 241 78 1 141 3 creA Protein CreA Escherichia coli (strain K12)
P0AE92 1.29e-81 241 78 1 141 3 creA Protein CreA Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC)
P0AE93 1.29e-81 241 78 1 141 3 creA Protein CreA Escherichia coli O157:H7

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_06545
Feature type CDS
Gene creA
Product protein CreA
Location 149707 - 150198 (strand: -1)
Length 492 (nucleotides) / 163 (amino acids)

Contig

Accession contig_6
Length 178871 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1143
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF05981 CreA protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3045 Signal transduction mechanisms (T) T Periplasmic catabolite regulation protein CreA (function unknown)

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05805 CreA protein - -

Protein Sequence

MNQTRRSILGIITAISLSSLSFLSHGEEIGSVDTVFKILGPDHKIVVEAFDDPDVENITCYLSRAKTGGISGGLGLAEDTSDAAISCQQVGPVTVSDKVKKGRKDKGQVVFQKRTSMVFKKLQVVRFYDEKRHALIYLTYSDKVVDGSPKNALSAVPIMPWNK

Flanking regions ( +/- flanking 50bp)

ATCTTTAAAATCATACAATTTTCAAATGATTTTCTTGGGCTATTAAGATTATGAATCAGACTCGCCGGTCTATACTGGGAATTATTACAGCTATTTCATTGAGTTCGTTATCCTTTTTGAGCCATGGTGAAGAAATCGGCTCTGTGGACACTGTGTTCAAAATTCTGGGGCCGGACCACAAGATTGTGGTGGAAGCCTTTGATGATCCGGATGTGGAAAATATCACCTGTTACCTGAGCCGGGCAAAAACCGGCGGGATCTCGGGCGGGCTGGGTCTGGCGGAGGATACGTCTGATGCCGCGATTTCCTGTCAGCAGGTCGGGCCGGTCACGGTCAGTGATAAAGTGAAAAAAGGCCGCAAAGATAAAGGCCAGGTGGTGTTCCAGAAACGGACATCTATGGTATTCAAGAAGTTACAGGTGGTTCGTTTCTATGATGAAAAGCGTCACGCGCTGATTTATCTGACCTATTCGGATAAAGTGGTCGACGGCTCGCCGAAGAATGCGCTGAGCGCGGTGCCGATTATGCCGTGGAACAAATAACCGGATAACAGCAACAACAAATCCCCGGTGGTGCTCAGCATCACCGGGGA