Homologs in group_888

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_05870 EHELCC_05870 100.0 Morganella morganii S2 alsT Na+/alanine symporter
NLDBIP_06190 NLDBIP_06190 100.0 Morganella morganii S4 alsT Na+/alanine symporter
LHKJJB_03070 LHKJJB_03070 100.0 Morganella morganii S3 alsT Na+/alanine symporter
HKOGLL_06545 HKOGLL_06545 100.0 Morganella morganii S5 alsT Na+/alanine symporter
F4V73_RS09035 F4V73_RS09035 93.2 Morganella psychrotolerans - sodium:alanine symporter family protein
PMI_RS10415 PMI_RS10415 84.5 Proteus mirabilis HI4320 - sodium:alanine symporter family protein

Distribution of the homologs in the orthogroup group_888

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_888

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6LX42 9.13e-141 414 53 7 457 1 agcS Sodium/alanine symporter AgcS Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
P44917 5.41e-138 407 49 5 451 3 HI_0883 Uncharacterized transporter HI_0883 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O34708 6.68e-97 302 41 5 445 3 yflA Uncharacterized transporter YflA Bacillus subtilis (strain 168)
P44555 4.86e-88 280 35 9 466 3 HI_0183 Uncharacterized transporter HI_0183 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O32060 1.93e-85 273 38 7 459 3 yrbD Putative sodium/proton-dependent alanine carrier protein YrbD Bacillus subtilis (strain 168)
O31464 2.12e-82 265 36 9 452 3 glnT Probable sodium/glutamine symporter GlnT Bacillus subtilis (strain 168)
P30144 9.77e-79 257 45 4 319 1 dagA Na(+)-linked D-alanine glycine permease Pseudoalteromonas haloplanktis
P30144 1.41e-11 70 33 1 116 1 dagA Na(+)-linked D-alanine glycine permease Pseudoalteromonas haloplanktis
Q45068 1e-71 237 34 10 426 2 alsT Amino-acid carrier protein AlsT Bacillus subtilis (strain 168)
P30143 1.12e-70 234 35 6 447 3 yaaJ Uncharacterized transporter YaaJ Escherichia coli (strain K12)
P30145 3.6e-49 177 31 7 407 1 acp Sodium/proton-dependent alanine carrier protein Bacillus sp. (strain PS3)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_04580
Feature type CDS
Gene alsT
Product Na+/alanine symporter
Location 113517 - 114896 (strand: -1)
Length 1380 (nucleotides) / 459 (amino acids)

Contig

Accession contig_4
Length 199551 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_888
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01235 Sodium:alanine symporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1115 Amino acid transport and metabolism (E) E Na+/alanine symporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03310 alanine or glycine:cation symporter, AGCS family - -

Protein Sequence

MDLITEWLGALNGVVWGVPMLVGILGVGLYMQIRLGFLPIRKLGTGFRLLFQRNESRGEGQISPFNALMTALSATIGTGNIAGVATAVVMGGPGALFWMWMTALVGMATKYSEAVLAVRYREVDKYGQYVGGPMYYIKNGLGPKWVWLGTLFAVFGACAGFGIGNTVQANSVADVLESNFGINKWVTSVALVLLVGAVLIGGIRRISDVAGKLVPFMTVGYFGAGLVVLALNISEIPAAFSLIITSAFTPVAAQGGFAGATVWAAIRFGVARGVFSNEAGLGSAPIAHAAAKTQNPIRQGLIAMLGTFIDTIIVCSVTGLTIVIMGGWLTAETGATLTASSFKAAIPGGNYIVAIALTIFAFTTILGWSFYGEKCVQYLFGVKAIKVFRVLWLIALPIGATQSLEFVWLLADTLNAMMAIPNLIALILLSPVVYRLTRDHIRDVNADSIDMANELYQKK

Flanking regions ( +/- flanking 50bp)

ATATGTGACGTGTAAAATAAAAAAGTAACAGAGCCGGTCAGGAGGTGTGAATGGATTTGATAACAGAGTGGCTGGGCGCGCTGAACGGCGTGGTATGGGGTGTGCCGATGCTGGTGGGAATACTGGGTGTCGGCTTATATATGCAGATTCGGCTGGGTTTTTTGCCGATCCGTAAACTGGGAACCGGGTTCAGATTATTATTTCAGCGCAATGAATCACGCGGGGAAGGGCAGATCTCCCCGTTTAACGCCCTGATGACGGCATTATCCGCCACTATCGGCACCGGCAATATTGCCGGTGTGGCAACAGCAGTGGTGATGGGCGGGCCGGGGGCGCTGTTCTGGATGTGGATGACGGCACTGGTGGGTATGGCGACAAAATACTCAGAAGCCGTGCTGGCGGTTCGTTATCGTGAAGTGGATAAATACGGGCAGTATGTCGGCGGCCCGATGTATTACATCAAAAACGGCCTCGGCCCGAAATGGGTCTGGCTGGGAACACTGTTTGCGGTATTTGGTGCCTGTGCCGGATTCGGTATCGGGAACACGGTTCAGGCCAACTCCGTGGCTGATGTGCTGGAGAGTAACTTCGGCATCAACAAATGGGTGACCAGCGTGGCGCTGGTGCTGCTGGTCGGTGCGGTACTGATTGGCGGGATCCGCCGTATCTCAGACGTGGCCGGTAAACTGGTACCGTTTATGACCGTCGGCTACTTTGGTGCCGGTCTTGTGGTGCTCGCGCTGAATATCAGTGAAATTCCGGCGGCGTTTTCCCTCATTATTACTTCTGCCTTTACACCGGTGGCGGCACAGGGCGGGTTTGCCGGGGCGACCGTCTGGGCGGCTATCCGTTTCGGGGTGGCGCGCGGCGTATTCTCCAACGAGGCGGGTCTGGGCAGTGCACCGATAGCGCATGCTGCCGCGAAAACCCAGAACCCGATCCGTCAGGGGCTGATCGCCATGCTCGGTACCTTTATTGACACCATTATTGTCTGCTCGGTAACCGGCCTGACCATTGTCATTATGGGCGGCTGGCTGACAGCGGAAACCGGTGCCACACTGACCGCTTCCTCTTTCAAAGCGGCGATTCCGGGCGGAAACTATATTGTGGCGATTGCACTGACGATTTTTGCCTTCACTACAATCCTCGGCTGGAGTTTTTACGGTGAGAAGTGCGTCCAGTATCTGTTCGGCGTGAAGGCGATTAAGGTTTTCCGTGTGCTGTGGCTGATAGCACTACCGATTGGCGCCACACAGTCTCTGGAGTTTGTCTGGCTGCTGGCGGATACCCTGAATGCCATGATGGCGATCCCGAACCTGATAGCACTGATCTTATTAAGCCCGGTGGTATACCGTCTGACGCGTGACCACATCCGGGATGTTAATGCGGACAGTATTGATATGGCGAATGAGTTATATCAGAAGAAATAACGGTGGGAATTGTAAATAACGGGCAGGAAACTGCCCGTTATTTTTCTGAT