Homologs in group_888

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_04580 FBDBKF_04580 93.2 Morganella morganii S1 alsT Na+/alanine symporter
EHELCC_05870 EHELCC_05870 93.2 Morganella morganii S2 alsT Na+/alanine symporter
NLDBIP_06190 NLDBIP_06190 93.2 Morganella morganii S4 alsT Na+/alanine symporter
LHKJJB_03070 LHKJJB_03070 93.2 Morganella morganii S3 alsT Na+/alanine symporter
HKOGLL_06545 HKOGLL_06545 93.2 Morganella morganii S5 alsT Na+/alanine symporter
PMI_RS10415 PMI_RS10415 82.7 Proteus mirabilis HI4320 - sodium:alanine symporter family protein

Distribution of the homologs in the orthogroup group_888

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_888

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q6LX42 7.39e-142 417 54 7 457 1 agcS Sodium/alanine symporter AgcS Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
P44917 4.03e-133 395 47 5 449 3 HI_0883 Uncharacterized transporter HI_0883 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O34708 1.43e-94 296 40 5 458 3 yflA Uncharacterized transporter YflA Bacillus subtilis (strain 168)
P44555 4.13e-85 272 35 8 453 3 HI_0183 Uncharacterized transporter HI_0183 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
O32060 2.64e-82 265 36 8 469 3 yrbD Putative sodium/proton-dependent alanine carrier protein YrbD Bacillus subtilis (strain 168)
P30144 4.31e-80 261 44 5 339 1 dagA Na(+)-linked D-alanine glycine permease Pseudoalteromonas haloplanktis
P30144 4.25e-12 71 32 1 116 1 dagA Na(+)-linked D-alanine glycine permease Pseudoalteromonas haloplanktis
O31464 7.01e-79 256 35 9 452 3 glnT Probable sodium/glutamine symporter GlnT Bacillus subtilis (strain 168)
Q45068 2.87e-70 233 35 10 426 2 alsT Amino-acid carrier protein AlsT Bacillus subtilis (strain 168)
P30143 1.3e-67 227 34 7 450 3 yaaJ Uncharacterized transporter YaaJ Escherichia coli (strain K12)
P30145 1.57e-49 178 31 7 407 1 acp Sodium/proton-dependent alanine carrier protein Bacillus sp. (strain PS3)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS09035
Feature type CDS
Gene -
Product sodium:alanine symporter family protein
Location 1888209 - 1889624 (strand: -1)
Length 1416 (nucleotides) / 471 (amino acids)

Contig

Accession term accessions NZ_VXKB01000001 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 2012992 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_888
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF01235 Sodium:alanine symporter family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1115 Amino acid transport and metabolism (E) E Na+/alanine symporter

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K03310 alanine or glycine:cation symporter, AGCS family - -

Protein Sequence

MDLITEWLGTLNGIVWGVPMLVGILGVGLFMQIRLSFLPIRKLGTGFKLLFQRNESRGEGQISPFNALMTALSATIGTGNIAGVATAVVMGGPGALFWMWMTALVGMATKYSEAVLAVRFREVDKYGQYVGGPMYYIKNGLGPKWIWLGTLFAFFGACASFGIGNTVQANSVADVLESNFGVDKWITSVVLVVLVGAVLIGGIRRISDVAGKLVPFMTVGYFGAGLVVLALNASEIPAAFSLIVTSAFTPVAAQGGFAGAAVWAAIRFGVARGVFSNEAGLGSAPIAHAAAKTQNPIRQGLIAMLGTFIDTIIVCSVTGLTIVIMGGWLTNETGATMTASSFKAAIPGGNYIVAVALTIFAFTTILGWSFYGEKCVQYLFGLKAIKVFRVLWIIALPVGATQSLDFVWLLADTLNAMMAIPNLIALMLLSPVVYRLTRDHIRDINADSITDSITGSAADSKDITNQLVDKK

Flanking regions ( +/- flanking 50bp)

ATTTGTGATGCGTGAAATGAAAAAATAACAGAGCCGGTCAGGGGGAATGAATGGACTTAATTACAGAGTGGCTGGGGACGTTAAACGGCATTGTGTGGGGCGTACCAATGCTGGTGGGGATACTGGGCGTGGGGTTGTTTATGCAGATACGGCTCAGCTTTTTGCCGATCCGTAAACTGGGTACCGGGTTTAAATTACTGTTTCAGCGTAATGAATCGCGCGGGGAAGGGCAGATCTCGCCGTTCAATGCACTGATGACCGCGCTGTCCGCAACTATCGGAACAGGTAATATTGCGGGTGTGGCAACGGCGGTCGTGATGGGCGGGCCGGGCGCACTGTTCTGGATGTGGATGACGGCACTGGTCGGCATGGCAACAAAATATTCAGAAGCGGTACTGGCAGTCCGCTTTCGTGAAGTGGATAAATACGGGCAATACGTTGGCGGCCCGATGTATTACATCAAAAATGGTTTAGGTCCGAAATGGATTTGGCTGGGTACACTGTTTGCTTTCTTTGGTGCCTGCGCGAGTTTTGGTATCGGAAATACGGTTCAGGCAAACTCAGTGGCTGATGTGCTGGAAAGCAACTTCGGGGTGGATAAATGGATAACCAGTGTCGTGCTGGTGGTGCTGGTCGGAGCGGTACTGATTGGCGGGATCCGCCGTATTTCTGATGTTGCGGGCAAACTTGTGCCCTTTATGACAGTCGGCTATTTCGGCGCGGGTTTAGTGGTGCTGGCGCTGAATGCCAGTGAAATTCCGGCGGCATTCTCACTGATTGTTACCTCTGCATTTACCCCGGTGGCAGCACAGGGCGGTTTTGCCGGTGCAGCAGTTTGGGCGGCTATTCGTTTTGGTGTGGCGCGCGGCGTGTTCTCTAATGAAGCGGGTCTGGGCAGTGCGCCGATTGCCCATGCTGCGGCAAAAACACAAAACCCTATCCGCCAGGGGTTGATCGCCATGCTGGGAACCTTTATTGATACCATTATTGTCTGTTCCGTTACCGGACTGACGATTGTGATTATGGGCGGTTGGTTAACCAACGAAACCGGTGCAACAATGACCGCATCATCCTTTAAAGCCGCTATCCCCGGCGGTAATTATATTGTGGCGGTTGCGCTGACCATTTTTGCATTCACCACTATCCTTGGCTGGAGTTTTTATGGTGAGAAATGTGTTCAGTATCTTTTTGGTCTGAAAGCGATCAAGGTATTCCGTGTGTTATGGATTATTGCGTTACCGGTTGGAGCCACCCAGTCTCTCGATTTTGTCTGGCTGCTGGCGGACACGCTGAATGCGATGATGGCTATTCCTAACCTGATTGCACTGATGTTACTCAGCCCTGTGGTGTACCGCCTGACGCGGGATCATATCCGTGATATTAATGCGGACAGTATTACAGACAGTATTACGGGCAGTGCTGCGGACAGTAAGGATATAACAAATCAGTTAGTTGATAAAAAGTAGTCAGTCTGCGGGGCGGATCTTTAGCTGAGTGCAGCCGCGTCATTGATGGT