Homologs in group_774

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
EHELCC_07505 EHELCC_07505 100.0 Morganella morganii S2 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
NLDBIP_07830 NLDBIP_07830 100.0 Morganella morganii S4 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
LHKJJB_07365 LHKJJB_07365 100.0 Morganella morganii S3 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
HKOGLL_03565 HKOGLL_03565 100.0 Morganella morganii S5 doxX Uncharacterized membrane protein YphA, DoxX/SURF4 family
F4V73_RS11885 F4V73_RS11885 96.9 Morganella psychrotolerans - DoxX family protein
PMI_RS18390 PMI_RS18390 82.7 Proteus mirabilis HI4320 - DoxX family protein

Distribution of the homologs in the orthogroup group_774

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_774

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P42619 2.56e-63 192 74 1 128 1 yqjF Inner membrane protein YqjF Escherichia coli (strain K12)
P0AD48 1.5e-17 76 37 3 123 3 yphA Inner membrane protein YphA Shigella flexneri
P0AD47 1.5e-17 76 37 3 123 1 yphA Inner membrane protein YphA Escherichia coli (strain K12)

  • Number of RefSeq hits:

General

Source Morganella morganii S1
Locus tag FBDBKF_03030
Feature type CDS
Gene doxX
Product Uncharacterized membrane protein YphA, DoxX/SURF4 family
Location 7827 - 8213 (strand: 1)
Length 387 (nucleotides) / 128 (amino acids)
In genomic island -

Contig

Accession contig_3
Length 210665 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_774
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF07681 DoxX

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2259 Function unknown (S) S Uncharacterized membrane protein YphA, DoxX/SURF4 family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K15977 putative oxidoreductase - -

Protein Sequence

MNNYAILVARIMMPVLFIVAGYGKLGDAYAGTQQYMQAMGVPGALLPLTILLELGGGLAILFGFLTRTTAIFTFGFTVLTALLFHSNFAEGANQLMFMKNFTIAGGYLLLAVTGPGKFSIDYLLKKKW

Flanking regions ( +/- flanking 50bp)

CAATCGTCATATTTACTATTCAGTATTGTTGAGCTAATAAGGATCTCACAATGAACAACTACGCTATTTTAGTCGCACGTATCATGATGCCTGTCTTATTTATTGTGGCCGGATACGGCAAATTAGGGGATGCTTATGCAGGAACTCAGCAATATATGCAGGCAATGGGTGTTCCGGGGGCATTGCTGCCGTTAACCATTCTGCTTGAACTGGGCGGCGGGCTGGCCATCCTGTTTGGTTTCTTAACCCGCACAACCGCGATTTTCACCTTTGGTTTTACTGTGCTGACCGCCCTGCTGTTCCACAGTAATTTTGCGGAAGGTGCCAACCAGTTAATGTTTATGAAAAACTTTACCATTGCAGGCGGTTATTTACTGCTGGCTGTTACCGGCCCGGGTAAATTCAGTATCGATTATTTACTGAAAAAGAAATGGTAATTGCATTCAGGCAAAGTCACACAGCAATATAATAAATAATACTATTGTGA