Homologs in group_161

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9 homologs were identified in 7 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_13170 FBDBKF_13170 29.1 Morganella morganii S1 - Methyltransferase
EHELCC_19515 EHELCC_19515 29.1 Morganella morganii S2 - Methyltransferase
NLDBIP_09250 NLDBIP_09250 29.1 Morganella morganii S4 - Methyltransferase
NLDBIP_19070 NLDBIP_19070 29.1 Morganella morganii S4 - Methyltransferase
LHKJJB_05015 LHKJJB_05015 29.1 Morganella morganii S3 - Methyltransferase
LHKJJB_18960 LHKJJB_18960 29.1 Morganella morganii S3 - Methyltransferase
HKOGLL_05900 HKOGLL_05900 29.1 Morganella morganii S5 - Methyltransferase
F4V73_RS02045 F4V73_RS02045 27.6 Morganella psychrotolerans - site-specific DNA-methyltransferase
PMI_RS04700 PMI_RS04700 27.9 Proteus mirabilis HI4320 - site-specific DNA-methyltransferase

Distribution of the homologs in the orthogroup group_161

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_161

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P43871 1.41e-122 356 54 2 295 1 hindIIIM Type II methyltransferase M.HindIII Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P20590 1.08e-17 85 26 7 298 3 hinfIM Type II methyltransferase M.HinfI Haemophilus influenzae
P50178 1.45e-16 81 26 11 297 3 llaDCHIB Type II methyltransferase M2.LlaDCHI Lactococcus lactis subsp. cremoris
P09358 1.9e-16 80 24 8 299 1 dpnA Type II methyltransferase M2.DpnII Streptococcus pneumoniae
P29538 3.56e-15 78 24 7 295 3 hpaIM Type II methyltransferase M.HpaI Haemophilus parainfluenzae
A6WWI2 1.82e-12 70 21 8 299 3 ccrM DNA methyltransferase CcrM Brucella anthropi (strain ATCC 49188 / DSM 6882 / CCUG 24695 / JCM 21032 / LMG 3331 / NBRC 15819 / NCTC 12168 / Alc 37)
P0C116 2.34e-12 70 21 8 299 3 ccrM DNA methyltransferase CcrM Brucella abortus biovar 1 (strain 9-941)
Q2YMK2 2.34e-12 70 21 8 299 2 ccrM DNA methyltransferase CcrM Brucella abortus (strain 2308)
B2S9Y5 2.66e-12 70 21 8 299 3 ccrM DNA methyltransferase CcrM Brucella abortus (strain S19)
Q8G242 2.74e-12 70 21 8 299 3 ccrM DNA methyltransferase CcrM Brucella suis biovar 1 (strain 1330)
B0CKH7 2.74e-12 70 21 8 299 3 ccrM DNA methyltransferase CcrM Brucella suis (strain ATCC 23445 / NCTC 10510)
A9M916 2.74e-12 70 21 8 299 3 ccrM DNA methyltransferase CcrM Brucella canis (strain ATCC 23365 / NCTC 10854 / RM-666)
A5VP58 2.76e-12 70 21 8 299 3 ccrM DNA methyltransferase CcrM Brucella ovis (strain ATCC 25840 / 63/290 / NCTC 10512)
Q8YFS6 2.88e-12 70 21 8 299 3 ccrM DNA methyltransferase CcrM Brucella melitensis biotype 1 (strain ATCC 23456 / CCUG 17765 / NCTC 10094 / 16M)
B8GZ33 1.21e-11 68 24 9 294 1 ccrMIM DNA methyltransferase CcrM Caulobacter vibrioides (strain NA1000 / CB15N)
P0CAW2 1.21e-11 68 24 9 294 1 ccrMIM DNA methyltransferase CcrM Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15)
O30569 1.94e-11 67 40 1 76 3 smeIM DNA methyltransferase CcrM Rhizobium meliloti (strain 1021)
P34721 2.78e-10 63 40 0 67 3 mboIBM Type II methyltransferase M2.MboI Moraxella bovis
Q45489 1.4e-09 62 22 5 236 3 bglIIM Type II methyltransferase M.BglII Bacillus subtilis
Q9S4X2 1.45e-09 60 41 0 67 3 yubD Putative methylase YubD Escherichia coli (strain K12)
P14827 7.47e-09 60 45 1 66 1 ecaIM Type II methyltransferase M.EcaI Enterobacter cloacae
O68556 1.53e-08 58 40 0 66 3 bglIM Type II methyltransferase M.BglI Bacillus subtilis
P28638 4.61e-08 57 40 0 62 1 yhdJ DNA adenine methyltransferase YhdJ Escherichia coli (strain K12)
P30774 1.81e-06 52 33 0 69 3 xcyIM Type II methyltransferase M.XycI Xanthomonas campestris pv. cyanopsidis
P14243 1.86e-06 52 31 0 69 3 cfr9IM Type II methyltransferase M.Cfr9I Citrobacter freundii
Q58893 3.79e-06 51 25 8 233 1 mjaVM Type II methyltransferase M.MjaV Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
P14751 5.79e-06 50 20 6 305 1 rsrIM Type II methyltransferase M.RsrI Cereibacter sphaeroides
P00473 8.58e-06 49 41 0 63 1 hhaIIM Type II methyltransferase M.HhaII Haemophilus parahaemolyticus
P71366 1.29e-05 50 36 2 63 3 mod Probable type III restriction-modification enzyme HindVI Mod subunit Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
P23192 1.37e-05 49 41 0 55 1 mboIIM Type II methyltransferase M1.MboII Moraxella bovis
O52692 0.000171 46 28 1 77 3 scaIM Type II methyltransferase M.ScaI Streptomyces caespitosus
P11409 0.000185 46 25 11 246 1 pvuIIM Type II methyltransferase M.PvuII Proteus hauseri
P29568 0.000242 45 31 1 87 1 mthZIM Type II methyltransferase M.MthZI Methanothermobacter thermautotrophicus
P23941 0.000786 44 41 0 43 1 bamHIM Type II methyltransferase M.BamHI Bacillus amyloliquefaciens
B1ZUS4 0.000899 43 33 4 95 3 prmA Ribosomal protein L11 methyltransferase Opitutus terrae (strain DSM 11246 / JCM 15787 / PB90-1)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS19215
Feature type CDS
Gene -
Product site-specific DNA-methyltransferase
Location 1157 - 2080 (strand: -1)
Length 924 (nucleotides) / 307 (amino acids)

Contig

Accession term accessions NZ_VXKB01000014 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 5045 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_161
Orthogroup size 10
N. genomes 7

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Genomic region

Domains

PF01555 DNA methylase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0863 Replication, recombination and repair (L) L DNA modification methylase

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K00571 site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72] - -

Protein Sequence

MQDDRQLNIKKNSVLHGNSIELIKKIETESTHLILSDIPYGIGAEDWDVLHNNTNSAYLGSSPAQKKTGAIFKKRGKPINGWSEADKRIPMEYQEWCDSWASEWFRILKPGASAIVFAGRRFSHRCICSMENAGFNLKDMLAWMRTKAPHRAQRLSCVYERRGDIDNVKRWDGWRVGNLQPTFEPILWFSKPYKMGGTIADNALLHGVGAYNQESFIRNTGKSENVISAGFSKGESGYHPTQKPISLMKTLIELTTQEGQLVVDPFCGSGSTLVAANELNRDFIGFDTDPNYVEVSLKRIASVHNLF

Flanking regions ( +/- flanking 50bp)

TGTTAGCATATACACTATAATTAATTAAATTCAATAACTTGGTTTTAGATATGCAAGATGATAGGCAATTAAATATAAAAAAAAATTCAGTTCTACATGGTAATTCTATTGAATTAATAAAAAAAATAGAAACAGAATCTACTCATTTAATATTGAGTGATATTCCTTACGGTATAGGAGCTGAAGATTGGGATGTGTTACACAATAACACCAATTCAGCTTACCTAGGATCCAGTCCAGCGCAGAAAAAAACAGGGGCCATTTTTAAAAAAAGAGGTAAACCTATCAATGGATGGTCAGAAGCAGACAAACGAATTCCAATGGAATATCAAGAATGGTGTGATTCTTGGGCTTCTGAATGGTTCAGAATTTTAAAACCAGGAGCTAGCGCAATAGTTTTTGCTGGACGTAGATTTTCTCATAGGTGTATATGCTCAATGGAAAATGCGGGTTTTAATCTAAAAGATATGCTTGCCTGGATGAGAACAAAAGCACCACACAGGGCTCAACGACTAAGTTGTGTATATGAACGCAGAGGTGATATTGACAACGTGAAACGGTGGGATGGGTGGAGAGTTGGTAACTTGCAACCCACTTTCGAGCCAATCCTTTGGTTTTCAAAACCATATAAAATGGGTGGAACTATAGCAGACAATGCTCTTCTGCACGGAGTCGGAGCTTATAACCAAGAATCATTTATCAGAAATACCGGAAAATCGGAAAATGTTATATCCGCAGGTTTTTCGAAAGGTGAGAGTGGTTATCACCCTACACAAAAACCAATATCTTTAATGAAAACACTAATAGAATTAACCACTCAAGAAGGTCAGCTTGTTGTAGACCCTTTCTGTGGAAGCGGCTCAACATTGGTTGCAGCCAATGAATTGAATAGAGATTTCATTGGCTTTGATACAGACCCTAACTATGTTGAAGTCAGCCTAAAAAGAATAGCATCAGTCCATAATTTATTTTAACTGATTTAGGAAAGTGAAAGAATATTGTTATTGTTCACTTTCCTGATCTG