Orthogroup:group_3737


Homologs in group_3737

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3 homologs were identified in 1 genome with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Source Gene Product
PMI_RS05020 PMI_RS05020 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS10880 PMI_RS10880 Proteus mirabilis HI4320 - fimbrial protein
PMI_RS17145 PMI_RS17145 Proteus mirabilis HI4320 - fimbrial protein

Distribution of group_3737 homologs

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Number of homologs in each genome (first column and blue bar chart)

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Phylogeny of group_3737 (midpoint rooted)


Phylogeny of the RefSeq best hits of group_3737

Orthogroup content: 3 members

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This page summarizes the annotation of all members of the orthologous group group_3737.
Gene name(s), gene product(s), a summary of protein lenght, and annotations (when available) are provided. Additionally, the number of times (occurence) an annotation is observed in the orthogroup is reported for each annotation.

Orthologs were identified with OrthoFinder. The annotation of orthologous proteins can differ depending the approach used to annotate the source genomes. Automated annotations are also subject to errors. Spurious clustering of non-orthologous proteins can also happen. This page allows to check for eventual inconsistencies.

Gene

# Gene name Occurence
1 - 3

Product

# Product Occurence
1 fimbrial protein 3

COG entry Annotation(s)

ID Occurences Function(s) cat. Function(s) descr. Description
COG3539 3 N Cell motility (N) Pilin (type 1 fimbrial protein)

Kegg Ortholog Annotation(s)

KO Occurences Description Pathways Modules
K07345 1 major type 1 subunit fimbrin (pilin) Shigellosis
Pertussis		 -
K07350 1 minor fimbrial subunit - -

Pfam domain Annotation(s)

Domain ID Occurences Description
PF00419 3 Fimbrial protein
PF09160 2 FimH, mannose binding
PF22003 1 MrkD-like receptor binding domain

Annotations of the 14 SwissProt hits

Annotation Number of occurrences
Fimbria adhesin protein 1
Fimbrial subunit type 1 1
Fimbrial-like protein FimF 1
Long polar fimbria protein A 1
Protein FimF 1
S-fimbrial protein subunit SfaA 1
S-fimbrial protein subunit SfaG 1
S-fimbrial protein subunit SfaH 1
Type 1 fimbrin D-mannose specific adhesin 1
Type-1 fimbrial protein subunit 1
Type-1 fimbrial protein, A chain 2
Uncharacterized fimbrial-like protein YdeQ 1
Uncharacterized fimbrial-like protein YdeS 1

Protein length

Min length 303
Max length 327
Mean length (sd) 313.3 (12.3)
Median length 310.0

Protein length distribution