Homologs in group_1330

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08230 FBDBKF_08230 95.5 Morganella morganii S1 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
EHELCC_13295 EHELCC_13295 95.5 Morganella morganii S2 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
NLDBIP_13635 NLDBIP_13635 95.5 Morganella morganii S4 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
LHKJJB_12920 LHKJJB_12920 95.5 Morganella morganii S3 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
HKOGLL_12110 HKOGLL_12110 95.5 Morganella morganii S5 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
PMI_RS16490 PMI_RS16490 81.4 Proteus mirabilis HI4320 wecB UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)

Distribution of the homologs in the orthogroup group_1330

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1330

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZAE3 0.0 634 80 0 376 3 wecB UDP-N-acetylglucosamine 2-epimerase Yersinia pestis
Q9L6R5 0.0 609 77 0 376 3 wecB UDP-N-acetylglucosamine 2-epimerase Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
Q8Z388 0.0 605 77 0 376 3 wecB UDP-N-acetylglucosamine 2-epimerase Salmonella typhi
P27828 0.0 602 77 0 376 1 wecB UDP-N-acetylglucosamine 2-epimerase Escherichia coli (strain K12)
Q8XAR8 0.0 601 77 0 376 3 wecB UDP-N-acetylglucosamine 2-epimerase Escherichia coli O157:H7
P58600 0.0 513 68 0 369 3 epsC Probable UDP-N-acetylglucosamine 2-epimerase Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000)
P52641 0.0 509 68 0 369 3 epsC Probable UDP-N-acetylglucosamine 2-epimerase Ralstonia solanacearum
A0A0U1RGY0 1.31e-161 460 57 1 373 1 sacA UDP-N-acetylglucosamine 2-epimerase Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
P45360 1.24e-138 402 56 2 370 3 CA_C2874 Putative UDP-N-acetylglucosamine 2-epimerase Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / IAM 19013 / LMG 5710 / NBRC 13948 / NRRL B-527 / VKM B-1787 / 2291 / W)
Q9X0C4 1.49e-133 389 52 3 370 3 TM_1034 Putative UDP-N-acetylglucosamine 2-epimerase Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8)
P39131 1.04e-132 387 54 3 370 1 mnaA UDP-N-acetylglucosamine 2-epimerase Bacillus subtilis (strain 168)
P52642 3.9e-129 378 52 1 367 3 rfbC UDP-N-acetylglucosamine 2-epimerase Salmonella borreze
Q58899 3.06e-59 199 35 13 383 1 wecB UDP-N-acetylglucosamine 2-epimerase Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440)
Q6LZC4 1.59e-56 192 34 13 375 1 wecB UDP-N-acetylglucosamine 2-epimerase Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
Q6M0B4 2.19e-54 186 35 16 382 1 MMP0357 UDP-N-acetylglucosamine 2-epimerase homolog Methanococcus maripaludis (strain DSM 14266 / JCM 13030 / NBRC 101832 / S2 / LL)
G3XD61 1.86e-40 149 32 12 378 1 wbpI UDP-2,3-diacetamido-2,3-dideoxy-D-glucuronate 2-epimerase Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q5ZXH8 1.47e-12 71 25 13 387 1 lpg0753 UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolyzing) Legionella pneumophila subsp. pneumophila (strain Philadelphia 1 / ATCC 33152 / DSM 7513)
Q91WG8 5.88e-06 52 23 17 403 1 Gne Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase Mus musculus
O35826 6.14e-06 52 23 17 403 1 Gne Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase Rattus norvegicus
Q7TQ49 6.53e-06 52 23 17 403 1 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase Cricetulus griseus
Q9Y223 1.51e-05 50 23 15 394 1 GNE Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase Homo sapiens

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18780
Feature type CDS
Gene wecB
Product UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing)
Location 25169 - 26299 (strand: 1)
Length 1131 (nucleotides) / 376 (amino acids)

Contig

Accession term accessions NZ_VXKB01000010 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 36620 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1330
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02350 UDP-N-acetylglucosamine 2-epimerase

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0381 Cell wall/membrane/envelope biogenesis (M) M UDP-N-acetylglucosamine 2-epimerase

Kegg Ortholog Annotation(s)

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG007639 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) VF0624 Immune modulation

Protein Sequence

MKVLTVFGTRPEAIKMAPLVHALAADNAFEAKVCVTAQHREMLDQVLHLFEITPDYDLNIMRPGQDLTDITCHILEGLKPVFADFKPDVVLVHGDTATTMATSLAAFYHRIPVGHVEAGLRTGNLYSPWPEEANRKIAGHLAMYHFAPTENSRENLLREGINGSHIFVTGNSVIDALLSVRDRIMQDKDLLDQLDAKYPFIDSNKKMILVTGHRRESFGDGFERICHALAEIATAHPEVQIVYPVHLNPNVSEPVKRILHDISNIVLISPQDYLPFVYLMNHAYMILTDSGGIQEEAPSLGKPVLVMRDTTERPEAIDAGTVRLVGTETDTIVREVTRLLTDPAAYHEMSRSHNPYGDGKACQRILEALKNNQVTL

Flanking regions ( +/- flanking 50bp)

AACCGCCACCGGCTCAAAGCCGGATATCATATAAATAAAAGAGAATCTCAGTGAAAGTATTGACTGTATTTGGTACCCGTCCTGAAGCCATCAAAATGGCTCCGCTGGTACATGCGCTGGCCGCAGATAACGCTTTTGAAGCAAAAGTCTGTGTCACCGCGCAACATCGTGAAATGCTGGATCAGGTCTTACACCTTTTTGAGATCACACCTGATTATGATCTCAATATTATGCGCCCGGGGCAGGATTTAACGGATATCACCTGTCATATTCTTGAAGGGTTGAAACCGGTTTTTGCCGATTTTAAACCCGATGTCGTTCTGGTTCACGGCGACACGGCAACAACCATGGCGACCAGCCTGGCGGCGTTCTATCACCGCATCCCGGTCGGACATGTTGAAGCCGGTCTGCGTACCGGAAATCTCTACTCGCCGTGGCCGGAAGAGGCCAACCGGAAAATCGCCGGACATCTGGCGATGTATCATTTTGCACCCACCGAAAACTCGCGTGAGAACTTACTGCGTGAGGGGATAAACGGCAGTCATATTTTTGTCACCGGTAACTCGGTGATTGATGCGCTGCTGTCTGTCCGCGACCGCATCATGCAGGATAAAGATTTGCTGGATCAACTGGATGCGAAGTATCCGTTTATCGACAGCAACAAAAAAATGATCCTTGTGACCGGTCACCGCCGTGAAAGTTTTGGGGATGGTTTTGAGCGGATTTGTCATGCGCTGGCCGAGATCGCCACTGCACATCCGGAAGTCCAGATTGTGTACCCGGTCCATCTCAACCCGAATGTGAGTGAGCCGGTAAAACGAATTCTGCATGATATCAGCAACATTGTTTTAATCAGCCCGCAGGATTACCTTCCTTTTGTGTATCTTATGAACCATGCTTATATGATCCTGACCGACTCCGGTGGTATCCAGGAAGAAGCACCGTCATTAGGTAAACCGGTTCTGGTGATGCGTGACACCACTGAGCGCCCGGAAGCGATTGACGCGGGTACTGTTCGTTTAGTCGGCACAGAAACCGACACTATCGTTCGCGAAGTAACACGATTGCTGACCGATCCGGCGGCTTATCATGAGATGAGCCGTTCACATAACCCGTACGGGGACGGAAAAGCGTGCCAGCGTATTCTTGAAGCATTGAAAAACAATCAGGTGACATTATGAGTTTTGAAACTATTTCTGTTGTCGGTCTGGGTTACATCGGTTTGCCAACA