Homologs in group_1329

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_08225 FBDBKF_08225 90.3 Morganella morganii S1 wzzE ECA polysaccharide chain length modulation protein
EHELCC_13300 EHELCC_13300 90.3 Morganella morganii S2 wzzE ECA polysaccharide chain length modulation protein
NLDBIP_13640 NLDBIP_13640 90.3 Morganella morganii S4 wzzE ECA polysaccharide chain length modulation protein
LHKJJB_12915 LHKJJB_12915 90.3 Morganella morganii S3 wzzE ECA polysaccharide chain length modulation protein
HKOGLL_12115 HKOGLL_12115 90.3 Morganella morganii S5 wzzE ECA polysaccharide chain length modulation protein
PMI_RS16485 PMI_RS16485 63.0 Proteus mirabilis HI4320 wzzE ECA polysaccharide chain length modulation protein

Distribution of the homologs in the orthogroup group_1329

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_1329

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
O33789 9.1e-153 436 62 2 344 3 wzzE ECA polysaccharide chain length modulation protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0AG02 8.85e-152 433 63 2 335 3 wzzE ECA polysaccharide chain length modulation protein Shigella flexneri
P0AG00 8.85e-152 433 63 2 335 1 wzzE ECA polysaccharide chain length modulation protein Escherichia coli (strain K12)
P0AG01 8.85e-152 433 63 2 335 1 wzzE ECA polysaccharide chain length modulation protein Escherichia coli O157:H7
P76372 2.02e-24 104 27 9 354 1 wzzB Chain length determinant protein Escherichia coli (strain K12)
O33953 9.72e-24 103 26 10 352 3 wzzB Chain length determinant protein Escherichia coli
P35272 5.48e-23 100 27 11 354 1 wzzB Chain length determinant protein Escherichia coli
P95730 5.88e-23 100 27 10 354 3 wzzB Chain length determinant protein Shigella dysenteriae
P37792 6.9e-23 100 27 8 351 1 wzzB Chain length determinant protein Shigella flexneri
Q05032 2.62e-19 90 26 10 350 3 wzzB Chain length determinant protein Escherichia coli O111:H-
P26266 8.76e-14 75 21 8 357 1 fepE Ferric enterobactin transport protein FepE Escherichia coli (strain K12)
Q04866 1.45e-13 73 25 10 344 1 wzzB Chain length determinant protein Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P44063 3.43e-10 62 28 5 184 4 HI_0866 Uncharacterized protein HI_0866 Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18775
Feature type CDS
Gene wzzE
Product ECA polysaccharide chain length modulation protein
Location 24007 - 25062 (strand: 1)
Length 1056 (nucleotides) / 351 (amino acids)

Contig

Accession term accessions NZ_VXKB01000010 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 36620 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_1329
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02706 Chain length determinant protein

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG3765 Cell wall/membrane/envelope biogenesis (M) M LPS O-antigen chain length determinant protein, WzzB/FepE family

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K05790 lipopolysaccharide biosynthesis protein WzzE - -

Virulence factor Annotation(s)

VF gene ID Protein VF ID Category
VFG023778 ECA polysaccharide chain length modulation protein VF0392 Immune modulation

Protein Sequence

MRSENNPDPQQTQYDQELDIRALFVSLWRGKVWIVGIAVVFALVSLGASYFMQQKWNSTAITDYPTVNNLGGYYSQQQFMRNLDNHLNAAQESAALLPIPNEAYQEFITQAASYDTRRDFWLQTDYYKSRMENDAKADAALLDEMINNITLTPRDDTKKLVNDTLTLTAESAEESAALLRQYIDFASNRAALNLNDELKGAWATRTQSLKALVKRQKMVAESLYQRETGLLKNALVTAQKQGISRSQTDVPVNELPKSQLFLLGTPMLQARLETLEATGPDFDKDYEQNIAMLSTLNVGPTLDESFRAYRYLRTPDEPIKRDSPRRAFMMIMWGFIGALAGAGVALARRRP

Flanking regions ( +/- flanking 50bp)

TCGCAAATCGGCCACACACTAAATTTTTAACCACAGAGGCTCGTGTTGATATGCGTTCAGAAAATAATCCGGACCCGCAACAAACGCAGTATGACCAGGAATTAGATATCCGCGCGCTGTTTGTTTCATTGTGGCGCGGCAAGGTATGGATAGTCGGTATTGCCGTTGTGTTTGCGCTGGTATCTCTGGGTGCCAGTTACTTTATGCAGCAAAAATGGAACTCGACGGCGATCACAGATTATCCGACGGTTAATAATTTAGGCGGATATTATTCACAGCAGCAATTTATGCGCAATCTGGATAACCATCTGAATGCGGCTCAGGAATCAGCAGCACTGCTGCCTATCCCGAATGAAGCCTACCAGGAATTTATTACTCAGGCGGCCTCTTATGATACCCGCCGTGATTTCTGGCTACAGACGGATTATTACAAATCCCGCATGGAAAATGATGCCAAAGCAGATGCCGCGCTGCTGGATGAGATGATCAATAACATCACGCTGACCCCGCGTGATGATACTAAAAAACTGGTCAATGATACGCTGACATTAACCGCTGAATCTGCGGAAGAATCAGCAGCACTGCTGCGCCAGTATATTGATTTTGCCAGCAACCGTGCAGCTCTGAACCTGAATGATGAACTGAAAGGCGCGTGGGCAACCCGCACACAATCACTGAAAGCACTGGTGAAACGCCAGAAAATGGTGGCTGAATCTCTTTATCAGCGCGAAACCGGTTTGCTGAAAAATGCACTCGTGACGGCACAAAAACAGGGTATCAGCCGCAGCCAGACAGATGTTCCTGTCAATGAACTGCCGAAATCACAGCTCTTTTTATTAGGTACACCAATGTTGCAGGCACGCCTGGAAACACTGGAAGCCACCGGGCCGGATTTTGATAAAGACTATGAGCAGAATATCGCCATGTTATCGACACTGAATGTCGGTCCGACACTGGATGAGAGCTTCCGTGCATATCGTTACCTGCGTACACCGGATGAGCCAATCAAGCGCGACAGTCCGCGCCGTGCGTTCATGATGATTATGTGGGGCTTTATCGGTGCGCTGGCAGGAGCCGGTGTGGCACTGGCCCGTCGTCGTCCGTAGTTACGGTAAGAAATAACCGGCCGGAAACCTGTGTTCCGGCCTGTTTTAAG