Homologs in group_2217

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16945 FBDBKF_16945 88.2 Morganella morganii S1 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
EHELCC_16645 EHELCC_16645 88.2 Morganella morganii S2 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
NLDBIP_16855 NLDBIP_16855 88.2 Morganella morganii S4 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
LHKJJB_16615 LHKJJB_16615 88.2 Morganella morganii S3 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
HKOGLL_17580 HKOGLL_17580 88.2 Morganella morganii S5 rmuC DNA anti-recombination protein (rearrangement mutator) RmuC
PMI_RS17570 PMI_RS17570 63.9 Proteus mirabilis HI4320 rmuC DNA recombination protein RmuC

Distribution of the homologs in the orthogroup group_2217

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2217

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
Q8ZAL8 0.0 536 63 1 422 3 rmuC DNA recombination protein RmuC homolog Yersinia pestis
P0AG73 1.14e-171 494 52 1 468 3 rmuC DNA recombination protein RmuC Shigella flexneri
P0AG71 1.14e-171 494 52 1 468 3 rmuC DNA recombination protein RmuC Escherichia coli (strain K12)
P0AG72 1.14e-171 494 52 1 468 3 rmuC DNA recombination protein RmuC Escherichia coli O157:H7
P0A2B7 9.4e-171 491 60 0 396 3 rmuC DNA recombination protein RmuC Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
P0A2B8 9.4e-171 491 60 0 396 3 rmuC DNA recombination protein RmuC Salmonella typhi
Q9KVQ7 3.97e-157 458 55 4 423 3 rmuC DNA recombination protein RmuC homolog Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961)
Q9I4U3 8.7e-110 335 44 7 413 3 rmuC DNA recombination protein RmuC homolog Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1)
Q9JXH2 1.82e-107 334 44 5 405 3 rmuC DNA recombination protein RmuC homolog Neisseria meningitidis serogroup B (strain ATCC BAA-335 / MC58)
Q9JWG3 4.35e-107 333 44 5 405 3 rmuC DNA recombination protein RmuC homolog Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491)
Q9CLG7 2.88e-79 258 38 1 354 3 rmuC DNA recombination protein RmuC homolog Pasteurella multocida (strain Pm70)
P44733 4.65e-75 245 36 1 356 3 rmuC DNA recombination protein RmuC homolog Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd)
Q9REQ3 6.84e-48 174 29 11 440 3 rmuC DNA recombination protein RmuC homolog Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4)
O84832 9.27e-31 126 29 5 276 3 rmuC DNA recombination protein RmuC homolog Chlamydia trachomatis serovar D (strain ATCC VR-885 / DSM 19411 / UW-3/Cx)
Q9PL95 3.93e-28 119 28 5 276 3 rmuC DNA recombination protein RmuC homolog Chlamydia muridarum (strain MoPn / Nigg)
Q9Z6S7 1.09e-27 117 26 8 346 3 rmuC DNA recombination protein RmuC homolog Chlamydia pneumoniae
Q4UMY2 3.23e-12 71 25 8 237 3 rmuC DNA recombination protein RmuC homolog Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)
Q92GR5 3.93e-12 71 26 8 237 3 rmuC DNA recombination protein RmuC homolog Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q1RJ81 3.46e-11 68 26 9 238 3 rmuC DNA recombination protein RmuC homolog Rickettsia bellii (strain RML369-C)
Q9ZCN3 1.03e-10 67 24 6 237 3 rmuC DNA recombination protein RmuC homolog Rickettsia prowazekii (strain Madrid E)
Q68W48 3.7e-10 65 24 6 240 3 rmuC DNA recombination protein RmuC homolog Rickettsia typhi (strain ATCC VR-144 / Wilmington)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18415
Feature type CDS
Gene rmuC
Product DNA recombination protein RmuC
Location 16613 - 18037 (strand: -1)
Length 1425 (nucleotides) / 474 (amino acids)

Contig

Accession term accessions NZ_VXKB01000009 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 74461 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2217
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF02646 RmuC family

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1322 Replication, recombination and repair (L) L DNA anti-recombination protein (rearrangement mutator) RmuC

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K09760 DNA recombination protein RmuC - -

Protein Sequence

MDIQWLYGFIGILSGVLLGGGIVWFSLQQRLAEKNRILNENTGQLAVLEETRRQAVYWQQSHEQSEQALQNARNISAQQEAEIRELSTRLEESRLAAEEKQRLLLNSEQRLNTQFENLAARIFEQNGRRTDELNRQSLSLLLHPFREQLDNFNRQVQESYSQESRERHTLTHEIQRLQQLNLHMAQEAVNLTNALKGDNKMQGNWGETILARILEASGLREGHEFATQVNLKSEQQNRYQPDVVIYLPQNKQVIVDAKVSLVAYERYFNSDTEDARRAALTEHINSVRQHIRGLSHKAYQDLNGINSLDYVLMFIPVEPAFLAAIGQESTLLDDALRSNIMLVSPSTLLVALRTISNLWRYEHQNENSQAIAQRAARLYDKLRLFVEEMEGIGSALDKAQGTYHDAMKKLTTGRGNLLLQAENFRELGVEVKRPLDENLVKKARLSEEQETQQYASSGDPANFAEQHNAHRVLR

Flanking regions ( +/- flanking 50bp)

TGGTATTTTACCGTAAGCGGCGTAAGTTATACGCAGAGGAGACAGCCATCGTGGATATTCAGTGGCTTTATGGTTTTATCGGTATTTTAAGTGGGGTTCTGCTGGGCGGCGGTATTGTCTGGTTCAGTCTGCAACAGCGGCTGGCAGAAAAAAACCGCATACTGAATGAAAATACCGGGCAGCTTGCGGTACTGGAAGAAACCAGGCGTCAGGCTGTGTACTGGCAGCAGTCACATGAGCAAAGTGAACAGGCATTACAAAATGCCCGCAATATCAGTGCGCAACAGGAAGCTGAAATCCGTGAACTGAGCACCCGGCTGGAAGAGAGCCGTCTGGCGGCAGAAGAAAAACAGCGCCTGCTGCTGAACAGCGAACAACGCCTGAATACCCAGTTTGAAAATCTTGCCGCCCGTATTTTTGAACAAAACGGCCGCCGGACAGATGAACTGAACCGGCAGAGCCTCTCCCTGCTTCTGCACCCTTTTCGTGAACAACTGGATAATTTCAATCGTCAGGTACAGGAGAGCTACAGCCAGGAAAGCCGTGAACGGCATACGCTGACTCATGAGATCCAGCGCCTGCAACAGCTGAATCTGCATATGGCACAGGAAGCTGTGAATCTCACCAATGCCCTGAAAGGGGACAATAAAATGCAGGGAAACTGGGGGGAAACCATTCTCGCCCGTATCCTTGAAGCTTCCGGTCTGCGCGAAGGTCATGAATTTGCCACCCAGGTAAATCTGAAAAGTGAGCAGCAAAACCGTTATCAGCCGGATGTGGTGATTTATCTGCCGCAGAATAAACAGGTTATTGTGGATGCAAAAGTCTCGCTGGTTGCTTACGAGCGCTATTTTAACAGTGATACAGAAGATGCCCGCAGAGCAGCACTGACGGAGCACATTAACTCTGTCCGCCAGCATATTCGCGGGCTGAGCCACAAAGCGTACCAGGATTTGAACGGGATAAATTCACTGGATTATGTGCTGATGTTTATCCCTGTCGAACCTGCGTTTCTGGCAGCGATCGGGCAGGAGAGCACACTGTTGGATGATGCGCTGAGAAGTAACATTATGTTAGTCAGCCCGTCGACACTGCTGGTGGCATTGCGGACAATATCCAATCTCTGGCGCTATGAACATCAGAATGAAAACAGTCAGGCCATCGCGCAGCGTGCTGCCCGGTTATATGACAAACTCCGGCTGTTTGTTGAGGAGATGGAGGGTATCGGCAGCGCCCTGGATAAAGCACAGGGCACCTATCATGACGCGATGAAAAAACTGACCACCGGCAGGGGGAATCTACTGCTACAGGCAGAAAATTTCCGTGAACTGGGAGTGGAAGTAAAACGCCCGCTGGATGAAAATCTGGTAAAAAAAGCACGGCTGAGTGAAGAGCAGGAAACGCAGCAGTATGCGTCCTCCGGAGATCCGGCTAATTTCGCAGAACAACACAATGCGCATAGGGTTTTGCGGTAAAGGCTGATACACTTTTGCGATTATTAAACCGTGTGCACAGGCAAAACAGG