Homologs in group_4258

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4258

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4258

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
P76068 3.03e-12 63 38 0 80 4 ynaK ParB-like nuclease domain-containing protein YnaK Escherichia coli (strain K12)
Q1CVJ4 2.41e-07 53 37 4 118 1 parB Chromosome-partitioning protein ParB Myxococcus xanthus (strain DK1622)
O83295 5.53e-07 52 35 2 89 3 parB Probable chromosome-partitioning protein ParB Treponema pallidum (strain Nichols)
Q68XT3 2.46e-05 47 37 2 74 3 parB Probable chromosome-partitioning protein ParB Rickettsia typhi (strain ATCC VR-144 / Wilmington)
Q1RGT4 2.66e-05 47 36 2 74 3 parB Probable chromosome-partitioning protein ParB Rickettsia bellii (strain RML369-C)
Q9ZE87 3.02e-05 47 36 2 74 3 parB Probable chromosome-partitioning protein ParB Rickettsia prowazekii (strain Madrid E)
Q87BY1 4.42e-05 47 33 5 115 3 parB Probable chromosome-partitioning protein ParB Xylella fastidiosa (strain Temecula1 / ATCC 700964)
Q92JI0 0.00036 44 36 2 74 3 parB Probable chromosome-partitioning protein ParB Rickettsia conorii (strain ATCC VR-613 / Malish 7)
Q4UN91 0.000417 43 37 1 67 3 parB Probable chromosome-partitioning protein ParB Rickettsia felis (strain ATCC VR-1525 / URRWXCal2)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS18280
Feature type CDS
Gene -
Product ParB/Srx family N-terminal domain-containing protein
Location 95411 - 96085 (strand: -1)
Length 675 (nucleotides) / 224 (amino acids)

Contig

Accession term accessions NZ_VXKB01000008 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 103951 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4258
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF02195 ParB/Sulfiredoxin domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG1475 Cell cycle control, cell division, chromosome partitioning (D) D Chromosome segregation protein Spo0J, contains ParB-like nuclease domain

Protein Sequence

MEHKFEIVYLDPRKLIPYEKNAKKHNEQQIKDLSEAIKKRGFDQPITVDKDMVIITGHGRTEASIAAGLKVVPVIIRDDLGEKEVAAKRLEDNRLASTDYDALLLQEELKSLVDDDIAVYGFSERELNVLVEDMTGSVATDALVSDLSAETERQKDEHDEITRTVADEDVRLTDVMGFKSIPASAAIMVGDLLAHMEEITGKMGLDAFLTFAGDVSAKMYGEQQ

Flanking regions ( +/- flanking 50bp)

GCCGGGGAAGCCCTGTTTGTCATTGCTGAGAAGTACAAGGAAATCCGTTGATGGAACATAAATTTGAGATCGTCTATTTAGATCCGCGCAAACTCATCCCCTATGAGAAAAACGCAAAAAAACATAACGAGCAGCAAATCAAAGACCTGTCAGAAGCTATTAAGAAACGCGGCTTTGACCAACCGATCACCGTAGACAAAGACATGGTGATCATCACTGGCCACGGTCGCACCGAAGCGTCCATTGCTGCCGGGTTGAAAGTTGTGCCGGTTATTATCCGTGATGATTTGGGCGAAAAAGAGGTTGCCGCAAAGCGACTGGAAGATAACCGCCTTGCCAGTACCGACTATGACGCTCTGCTGTTGCAGGAAGAACTGAAATCACTGGTTGACGACGACATCGCGGTATACGGCTTTTCCGAGCGTGAGCTGAACGTGCTGGTAGAGGATATGACCGGTTCTGTGGCGACCGATGCACTGGTGTCCGATCTATCTGCGGAAACCGAACGCCAGAAAGACGAACACGATGAAATCACCCGCACTGTTGCAGATGAAGATGTTCGCCTGACTGACGTAATGGGCTTTAAATCGATTCCTGCGAGTGCCGCAATCATGGTCGGGGATTTGCTCGCCCACATGGAAGAAATCACGGGAAAAATGGGTCTGGACGCTTTTCTGACGTTTGCCGGTGACGTTTCCGCGAAGATGTACGGAGAGCAGCAATGAGCACCTACACCATCAATGTTTCGTTTGATACGCGGGTGACGAAAACAACC