Homologs in group_4189

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0 homologs were identified in 0 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product

Distribution of the homologs in the orthogroup group_4189

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_4189

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17540
Feature type CDS
Gene -
Product RimK-like protein
Location 143297 - 144235 (strand: -1)
Length 939 (nucleotides) / 312 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_4189
Orthogroup size 1
N. genomes 1

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Genomic region

Domains

PF08443 RimK-like ATP-grasp domain

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG0189 Amino acid transport and metabolism (E)
Coenzyme transport and metabolism (H)
Translation, ribosomal structure and biogenesis (J)
Secondary metabolites biosynthesis, transport and catabolism (Q)		 EHJQ Glutathione synthase, LysX or RimK-type ligase, ATP-grasp superfamily

Protein Sequence

MKNYILILSSMYDFSTDLVVQRLEDNGDSFIRLNKEQLSNYEIFLDPVNTTLKVRNEYIDLEISKIKSIWFRQPVFLRNTPGRTIDINEQLSLSQWNAFLRGLMVFDKAYWMNWPQATYAAESKPYQLMTAKKMGFSVPQTIISNSLGFDKLSSTNFIIKSMDTVLLKENDDCYFTYTSKASPEDFSLDQTRQAPITFQEYIEDKLDIRVTVIGYKVYAVAIKSNGNAISDDWRTLKKDDLEYVDIELPIRIKKLCIDYVKSLGLNYGAIDFIKTKDEYIFIEINPTGEWGWLSNEKRKIDYSIARELSEAN

Flanking regions ( +/- flanking 50bp)

AGAGCCACCAAAAAATGTGATGTAGAAACTGGTGAGGATCAAAAAGGAGAATGAAAAATTATATATTGATTCTATCAAGTATGTATGACTTTTCCACGGATTTGGTTGTTCAGAGGTTGGAAGATAATGGTGATTCTTTTATTCGACTAAATAAAGAACAATTAAGTAATTATGAGATTTTTTTAGATCCTGTAAATACAACTTTAAAGGTGAGAAATGAATATATTGATTTAGAGATATCTAAAATAAAATCAATTTGGTTTCGACAGCCTGTTTTTCTAAGAAATACTCCAGGACGGACTATTGATATAAACGAGCAACTTTCATTATCACAATGGAATGCTTTTCTTAGGGGGTTAATGGTTTTTGATAAGGCATATTGGATGAATTGGCCACAAGCAACATATGCTGCTGAATCTAAGCCATATCAGTTAATGACCGCAAAAAAAATGGGATTTTCTGTACCTCAAACGATTATTAGTAACTCTCTTGGTTTTGATAAACTCTCTTCAACAAATTTTATTATAAAGTCTATGGATACTGTTTTACTTAAAGAAAATGATGACTGCTATTTTACATACACATCCAAAGCTAGTCCTGAGGATTTTTCTTTAGACCAAACTAGGCAAGCACCGATAACATTTCAAGAATACATTGAGGATAAATTAGATATTAGAGTTACTGTTATTGGCTATAAAGTATACGCTGTTGCAATAAAATCTAATGGTAATGCTATCTCTGATGACTGGAGAACTTTAAAAAAGGACGACCTTGAATATGTAGATATTGAGCTTCCTATTAGAATTAAAAAACTTTGCATAGATTATGTTAAGTCTCTTGGGTTAAATTATGGCGCTATTGATTTTATCAAAACAAAAGATGAGTATATATTTATTGAAATAAATCCAACTGGAGAATGGGGATGGCTTTCTAATGAGAAAAGGAAAATTGATTATAGTATTGCAAGGGAATTATCTGAGGCTAATTAAAATATTCTCTAGAGTTATTGAAGAAGCATTCCCATTTATTTACTTTTATT