Homologs in group_2142

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6 homologs were identified in 6 genomes with OrthoFinder.
The following table displays the locus tag of each homolog, the organism to which it belongs, the gene name and product.

Locus tag Identity Source Gene Product
FBDBKF_16095 FBDBKF_16095 80.9 Morganella morganii S1 - DUF560 domain-containing protein
EHELCC_16130 EHELCC_16130 80.9 Morganella morganii S2 - DUF560 domain-containing protein
NLDBIP_17210 NLDBIP_17210 80.9 Morganella morganii S4 - DUF560 domain-containing protein
LHKJJB_17130 LHKJJB_17130 80.9 Morganella morganii S3 - DUF560 domain-containing protein
HKOGLL_16710 HKOGLL_16710 80.9 Morganella morganii S5 - DUF560 domain-containing protein
PMI_RS15440 PMI_RS15440 24.9 Proteus mirabilis HI4320 - surface lipoprotein assembly modifier

Distribution of the homologs in the orthogroup group_2142

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Number of homologs in each genome (first column) and amino-acid identity of the closest homolog (second column).

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Phylogeny of the RefSeq best hits of group_2142

Swissprot accession Eval Score ID (%) N gaps Alignment length Annot score Gene Description Organism
A0A0D5YKF0 9.03e-11 66 21 7 376 2 hsmA Hemophilin secretion modulator Acinetobacter baumannii
Q9CKU1 1.88e-05 50 20 12 319 3 PM1515 Surface lipoprotein assembly modifier Pasteurella multocida (strain Pm70)

  • Number of RefSeq hits:

General

Source Morganella psychrotolerans
Locus tag F4V73_RS17520
Feature type CDS
Gene -
Product surface lipoprotein assembly modifier
Location 137609 - 138724 (strand: 1)
Length 1116 (nucleotides) / 371 (amino acids)

Contig

Accession term accessions NZ_VXKB01000007 accessions NZ_VXKB01000000 Name: value, dtype: object
Length 196482 nucleotides
Topology linear
Plasmid False

Orthology

Orthogroup group_2142
Orthogroup size 7
N. genomes 7

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Genomic region

Domains

PF04575 Surface lipoprotein assembly modifier

COG entry Annotation(s)

ID Function(s) descr. Function(s) cat. Description
COG2956 Cell wall/membrane/envelope biogenesis (M) M Lipopolysaccharide biosynthesis regulator YciM/LapB, contains six TPR domains and a C-terminal metal-binding domain

Kegg Ortholog Annotation(s)

KO Description Pathways Modules
K07280 outer membrane protein - -

Protein Sequence

MAYLNQRPGLAITLYQAILEQKPHFFTAQLELARSYRADRQTGNALSLFRALSQRLPVTSPHYPEITRTITELSRALSWSLMLSAGSHYNNNYYQTPEPGAHCLHYNPDGSCYANLVTQKPHAVLQWRSDWDLRRLTALTGSHFLTQHYHTATRYDAANQVPNTVTLTAKAGYHYQDRHTLWQLTPVFEQHISAGTRFSANYGLHTYLHQQLSPHWSLSGRAALKQHRFQPRLHSHNGTEYQLMPQVTWRPHPATTLYLQGEATVHRKNDPYKHYRTAALHTGLSHLWHPFFSQSVHAVYSRKRYNHIHPLHRHTREDRSQQYSTTLAFYPPSSGQISPQLSLIHTRNHSTIPWLYTYRQTEIMLRFERLF

Flanking regions ( +/- flanking 50bp)

AGAAAGATAACCATGCTGATCCGTTACTTATATTATTCAGTCAGGCAAAATTGGCGTATTTAAATCAGCGCCCCGGACTGGCGATTACGTTATATCAGGCCATTTTGGAACAAAAGCCTCACTTTTTTACCGCACAGCTGGAACTCGCCCGCAGCTACCGGGCTGATCGCCAGACCGGCAATGCGCTCTCACTGTTCAGAGCACTCAGTCAGCGTCTGCCGGTGACATCCCCGCACTACCCGGAGATTACCCGTACCATTACCGAGCTGTCCCGGGCACTAAGCTGGTCACTTATGCTCAGCGCAGGCAGCCATTACAATAATAACTATTACCAGACTCCTGAACCCGGAGCACACTGCCTGCATTACAACCCGGACGGCTCCTGCTATGCCAATCTGGTTACACAAAAACCTCACGCCGTATTGCAGTGGCGCAGTGACTGGGATCTGCGCAGACTAACCGCTCTGACCGGCTCTCATTTTCTAACTCAGCACTACCACACCGCCACCCGTTATGATGCCGCCAATCAGGTTCCGAATACCGTGACACTGACAGCCAAAGCGGGATATCACTACCAGGATCGTCACACCCTGTGGCAACTGACACCGGTGTTTGAACAACACATCTCCGCCGGAACACGCTTCTCTGCCAATTACGGATTACACACTTACCTGCATCAGCAACTCAGCCCTCACTGGTCACTGAGCGGACGGGCAGCACTTAAACAGCACCGCTTTCAGCCCCGTCTGCATTCACACAACGGCACAGAATATCAGCTGATGCCGCAGGTTACCTGGCGTCCGCACCCTGCCACCACACTGTACCTGCAGGGGGAAGCTACCGTTCACCGGAAAAACGATCCCTATAAACACTACCGGACGGCCGCACTGCACACCGGTTTAAGCCACCTGTGGCATCCCTTCTTTTCTCAGTCTGTTCATGCGGTGTACAGCCGCAAACGCTATAACCATATACACCCGTTACACCGTCATACCAGGGAGGATCGCTCACAACAGTACAGTACAACGCTCGCCTTCTATCCGCCGTCATCCGGACAGATTTCACCACAGCTTTCTCTTATTCATACCCGGAACCACAGCACTATCCCGTGGCTTTATACCTACCGGCAAACTGAAATCATGCTGCGTTTTGAACGGCTGTTTTAACTGCATTTTCTTTTCTGTTTTTTTATTTCTTATCATCCGGGAATTGTTAT